Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00353 ATGGGTAACGGGATTGGGAAGCTCGGCGGTTGCTTTGCCGGAATCGACGACGGTAAGCGGCGGCCGGATATTTCCGTTCTGATATCGAATCCACTAGATGAAGGATTAGGGCACTCGTTCTGCTATGTCCGGCCGGATCCCTCGAGGCTTTCGTCGTCAAAAGTTCATTCCGACGAAACCACCACTTTCCGATCAATTTCCGGCGCCGCTGTGAGTGCCAATACATCGACGCCTCTTTCTACGTCTCTTCTTGATCTGTATTCATACAGTAGCATTGATCGAGCGCCGGCTTTTGAAAGTTCGAATTCTTTCGCTTCAATCCCTTTGCAGCCAATCCCTAGAAATATGATCAATTCGGGTCCAATTTCGGGGCATTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAGCGAGGGTTTATGTCGGGTCCATTGGATAAAGGGATTTTTTCGGGTCCGCTCGATAATTCTTCATCCACTGAATTTCAGAGGAGTTTTTCTCATGGAGGCGGGTTTAATTCCAGATCTAGATCCAGAAAAAACCGGTTGATTCGGATTCTTAGAAGCGCAATTCCGAAATCGATTTATCGAGGGAAGAATTCCATTGTGGCTCCGATTAAAGCGGTGAAAGAACCCGATTGGATCGTCATTTCCGAGAAGCATAATGAGAATTTGACGGTGAGTAGTTTGAATTTCAGTAGCGAGGGGAGTTTGGAAGATGATGAATCAATGCAGAGCCAAAATCTGCAGTGGGCGCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTCGTAGTTTCTGAAGAACATGGATGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCTGATTACCTCTTATCGAATTTATACTCCTCTGTTCATAAAGAGCTCAAAGGTTTGTTATGGGACGAAAACCTCGCTTTGGCTGGCGTCCCCGCTCCGGTCACTTCGCCGGTTAATCGGACGGGTGATGCTTGTTCTCGGTGTGTAGAACAAGAGAATCATCCTTCAAGAAGAAGAAAAGGTAAGAATTCAAGAGGCAAATTTAGAGGAGCGGCTGAGAAGTGGGAGGATAATCAGCGGCGGTGGAAATGCGAATGGGATCAGGAAAGATTAGAACTCGATCGGAGATTAAAGGAGCAGTTGAATCGATCTGAATCGAACGGATCGAGATCGATTAATCATTCAGATGTTCTTAAAGCTCTGTCCCAGGCATTGAAGAACACAGAAGAGGCCTATTTGGATATTGCAGACAAGGTGCTCGATGAAAATCCTGAACTAGCTTTGATGGGCTCTTGTGTTCTTGTGATGCTTATGAAGGGAGATGATGTTTATGTGATGAATGTTGGCGACAGTCGAGCTGTTTTAGCGCAGAAGGCCGATCCCGATTACTGGCTCGGGATGATTCGACAGGATTTGGAGAGGATTAGTGAAGAGCCAGTCACTCGGGCGTTCGGTGCTGGTTTCCTCAAACAGCCAAAATGGAACAATGCATTGTTGGAGATGTTCAGAATAGACTACGTAGGGAGATTGCCATACATCAGTTGTCAGCCATGTCTCTACCACCATAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACAAACGAAGAAGCAGTTTCCGAGGTCGAGCTTTTCATCACGTTACAACCCGAAGGCGACCCGGCTCAACATCTGATTGAATTACTGCTGTTTCGAGCTGCAAAGCGAGCTGGTATGGATTTCCACGAGCTGCTCGAAATACCGCAGGGGGACCGGAGGAAGTACCACGACGATGTGTCGATCATTGTGATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 1866 46.62 MGNGIGKLGGCFAGIDDGKRRPDISVLISNPLDEGLGHSFCYVRPDPSRLSSSKVHSDETTTFRSISGAAVSANTSTPLSTSLLDLYSYSSIDRAPAFESSNSFASIPLQPIPRNMINSGPISGHLERGFLSGPIERGFMSGPLDKGIFSGPLDNSSSTEFQRSFSHGGGFNSRSRSRKNRLIRILRSAIPKSIYRGKNSIVAPIKAVKEPDWIVISEKHNENLTVSSLNFSSEGSLEDDESMQSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDENLALAGVPAPVTSPVNRTGDACSRCVEQENHPSRRRKGKNSRGKFRGAAEKWEDNQRRWKCEWDQERLELDRRLKEQLNRSESNGSRSINHSDVLKALSQALKNTEEAYLDIADKVLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKADPDYWLGMIRQDLERISEEPVTRAFGAGFLKQPKWNNALLEMFRIDYVGRLPYISCQPCLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLIELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 1990725 1993449 + Carg03313-RA Car20g00353 168212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00353 621 Pfam Protein phosphatase 2C 475 562 IPR001932 -
Car20g00353 621 Pfam Protein phosphatase 2C 395 464 IPR001932 -
Car20g00353 621 Coils Coil 402 422 - -
Car20g00353 621 ProSiteProfiles PPM-type phosphatase domain profile. 240 612 IPR001932 -
Car20g00353 621 MobiDBLite consensus disorder prediction 333 356 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00580 Car20g00353 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01288 Car-Chr6:9234751 Car20g00353 Car-Chr20:1990725 1.24E-66 dispersed
Car14g01446 Car-Chr14:12116698 Car20g00353 Car-Chr20:1990725 4.95E-66 dispersed
Car16g01017 Car-Chr16:8658307 Car20g00353 Car-Chr20:1990725 3.32E-48 dispersed
Car20g00353 Car-Chr20:1990725 Car03g00605 Car-Chr3:5617688 5.49E-31 dispersed
Car02g00580 Car-Chr2:4427611 Car20g00353 Car-Chr20:1990725 0 wgd
Car20g00353 Car-Chr20:1990725 Car03g00373 Car-Chr3:4557480 0 wgd
Car20g00353 Car-Chr20:1990725 Car07g00975 Car-Chr7:5534797 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00353 - - cmax:111484437 921.768