Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00370 ATGACTAAGGGTCCTGGGCATGAAAATGATGCAAATTCAACTTTTGACAGCCCATCATTACTAGACACTAAGCGGGCACATCACTGGTTTATAGATGGTTGTGAGACACAGGTTTTCCCCAACAAGAAACAAGCAATTCAAGCTTCGAATAGTAAAATGACCGGAGCGCTGTCAAATGTGAATGTTCTTCCTTGGGATCATCATGCTGCTAATTATCAGTCTGTTTCACATCAACTTATCGGTCGCCTACTAGGACCTGAATCAATAAGGTCCGCTGACTTCGATCTAACAAAAACATCTTCTGTAATGTCTGATAATTTGGATCTCAGGAGAAAAGGTATTGAAGTTGAAGAGCAATATGGAGAGGATGCATCTGTTGGGTTGTCTGTTTCTCATGGTTTGGAGGACCCTGAAACATGTCTTAGCTACGGAGGAATTAGAAAAGTTAAACTCAATCAGATTAAAGATAACATACATGATCTGCAACCATGTCTAAGAAGTAATTCTAATAGGGAAGATGGTGGTCAACTTACCATAGAAGGCTACTATAAGGATATCGAAACGGGTCTTGTGTCTGTGGGATCAGCCTATATTAAGGAGGATGACAGTTTCAATTTGATGAACCAAACCTCCAACGATGGGGATCGCCACATTAGGTTACTAGGTCATAACGGGAAGGTGGACGACAATGCTGTCTCCGTCGGTGATGATTATGGTAAGCGGGATGCAAATATAATCTCATTTGACGGATTTCCCGATGAGCAAGATATTATCTCCTTAGGCAGGTCTCTGGGTAGCCATGACTCAACATTCTATGAACCTTCATTCCAAGCAACTGAAGCTGATGGTGTCACAGAATTGGAATCATCTAGTTTTGATGTAGGTGTAAGCTGTACACAGATAACTAAGCAAAAGCCTGATACGATGCCGAAGAGTAGACCAGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCAAATGTTAGAAGCTTGATATCAACTGGTATGCTCGATGGCGTTCCTGTTAAGTACGTTTCTGTAGCCAGAGAGGAGCTCCGTGGAATTATAAGGGGATCTGGCTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCCTACGAGTTTGAGCGTCACGCTGGCTGCAAAACAAAACACCCAAATAATCATATATACTTCGAGAATGGGAAGACGATTTACCAAATAGTACAAGAATTAAGAAGCACCCCAGAGAGCTTGTTGTTTGATACAATTCAAACAATATTTGGTGCACCTATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCATTTCAAGCAGCTACTCGTGAGCTTCAGCGCATATATGGTAAGGATGAACTTAACCTTTAG 1386 41.2 MTKGPGHENDANSTFDSPSLLDTKRAHHWFIDGCETQVFPNKKQAIQASNSKMTGALSNVNVLPWDHHAANYQSVSHQLIGRLLGPESIRSADFDLTKTSSVMSDNLDLRRKGIEVEEQYGEDASVGLSVSHGLEDPETCLSYGGIRKVKLNQIKDNIHDLQPCLRSNSNREDGGQLTIEGYYKDIETGLVSVGSAYIKEDDSFNLMNQTSNDGDRHIRLLGHNGKVDDNAVSVGDDYGKRDANIISFDGFPDEQDIISLGRSLGSHDSTFYEPSFQATEADGVTELESSSFDVGVSCTQITKQKPDTMPKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQRIYGKDELNL 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2061582 2065810 - Carg03296-RA Car20g00370 168229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00370 461 Pfam Tify domain binding domain 356 411 IPR032308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00597 Car20g00370 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00370 Car-Chr20:2061582 Car14g00222 Car-Chr14:1048706 2.16E-06 dispersed
Car14g00139 Car-Chr14:648141 Car20g00370 Car-Chr20:2061582 6.28E-43 wgd
Car02g00597 Car-Chr2:4517071 Car20g00370 Car-Chr20:2061582 0 wgd
Car20g00370 Car-Chr20:2061582 Car04g00208 Car-Chr4:1159173 5.51E-40 wgd
Car20g00370 Car-Chr20:2061582 Car04g01102 Car-Chr4:6347091 2.33E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00370 - - bhj:120089449 856.67