Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00382 ATGGATTGTAGAAGAAGATTTGGGTTACTGTTCTGGATTTTGTTCATTTCGTTGCTGCCGTGCATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTTATTGACTGTGGATCGCCGGCTAATGTATCTGTGGGTAATCGTGTTTTCATGGCCGATAATTTGGCCTCCAAGTTGCTTTCCACCCCAAAAGTCATTCTGGCTAATACGTCTTCAGTGCCTGCCAGTTCTTCTAACGATTCGTCGCTGTTTGGAACGGCTAGAATCTTCACTGGATCATCAAAATTCAAGTTTCCAATTACGGCTGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTCCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAAATTTTGTTCTGCTGCGAGATTTAGTTGCTGTTAAGGATCCTGTGGTCAAAGAGTTCTCTGTTAACGTAGCTTCAGATACTCTTGAAGTTATATTTACTCCTGTTAATGGCTCCTTTGCATATGTGAATGCCATTGAAGTTACTTCTGTTCCTGACATTCTCATCACTGATGAAGCCAGTTTGTTAGAACCGTCTGGTAAATTCGACGGGCTATCTGCTCTGGCATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAGGTTTCTCCAGATAAAGATCCTCTCGCGCGGAGTTGGGTTCCTGATGAGAGCTTTCTAGTTAATAAGAATTCTGCAATAAGTTTCTCTAACATTGCAGCTGTTAAATATAGCGATGATGGGGCAGCTCCAGAGATTGCTCCAAATGTTGTCTACGGTACCCTAACCGAGATGAACTCGAAGGATGATCCAAGCAGTAATTTCAATGTGACATGGCGATTTAAAGTGGACCCGGAGTTTCAGTACCTTGTTCGGTTTCACTTTTGTGACATTGTGAGCAAAGCTCTACACCAACTTTATTTCAATGTTTACGTTGACTCATGGTTGGTCGCTCGGGATTTAGATCTTAGTATTCCTCTTAACAATGCTCTGGCCACTCCATACTATATGGACGCTGTTACAGGATTGATCAATAATGACATACTTCTTGTGAGCATTGGCCCAGCAAATTTAGCCAATGTGTATCCAAATGCTATTCTAAATGGTCTGGAAATCATGAAAATGAACAACTCAGTTGGCAGTCTTAGTGGGGAAGACTCTGTAATTAGTTTTCTGAACTCGACTTCTTCCAATAAGCACATTGGCGTGATTGTGGGTGTAACCGTTGGTGCATTTGTTGCAGCTATGTTGGTCGCTGTTCTGTTTATACTGAACAGACGAAGAAGAAAGGGAATGCATCAAGCTCCATCAAAAACATGGATTTCAATATCGACTGCTGGAGGAATGTCACACACTATGGGAAGTGTTTCCGCCACACGGTTTGACATTCCGGGTGTGGATGATCTCTCAGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAGTCTGAAGTTGAGTATCCTGGCAATGTCGATGACCATGGTGTGTCATTCTTTTCTGAATTTCCCTCTCCGTTTGGGAGCGGTGTCGAGGCGCTTTGTCGT 1578 42.97 MDCRRRFGLLFWILFISLLPCISCLFNPVDNYLIDCGSPANVSVGNRVFMADNLASKLLSTPKVILANTSSVPASSSNDSSLFGTARIFTGSSKFKFPITAGRHWIRLYFYPFVFPGFNMSAANFSVSTQNFVLLRDLVAVKDPVVKEFSVNVASDTLEVIFTPVNGSFAYVNAIEVTSVPDILITDEASLLEPSGKFDGLSALAYETVARVNMGGPKVSPDKDPLARSWVPDESFLVNKNSAISFSNIAAVKYSDDGAAPEIAPNVVYGTLTEMNSKDDPSSNFNVTWRFKVDPEFQYLVRFHFCDIVSKALHQLYFNVYVDSWLVARDLDLSIPLNNALATPYYMDAVTGLINNDILLVSIGPANLANVYPNAILNGLEIMKMNNSVGSLSGEDSVISFLNSTSSNKHIGVIVGVTVGAFVAAMLVAVLFILNRRRRKGMHQAPSKTWISISTAGGMSHTMGSVSATRFDIPGVDDLSGVSMSRVFSQLVKSEVEYPGNVDDHGVSFFSEFPSPFGSGVEALCR 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2130744 2133740 + Carg03284-RA Car20g00382 168241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00382 526 Pfam Malectin-like domain 34 385 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00382 Car-Chr20:2130744 Car09g00807 Car-Chr9:4886675 5.98E-107 dispersed
Car02g00610 Car-Chr2:4609613 Car20g00382 Car-Chr20:2130744 4.75E-09 wgd
Car20g00382 Car-Chr20:2130744 Car04g00230 Car-Chr4:1279295 5.39E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00382 - - csv:101218488 753.821