Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00418 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGTCGTTTGTTTCGTTCTGGTTCTGATTTCCATAATCATCGAACACATTCTCCATCTCATTGGAAAGTGGCTTAAGAAGAAGCACAAACGAGCTCTTTACGAAGCTCTGGAGAAGATCAAATCTGAGCTGATGCTGTTGGGGTTCATTTCTCTGCTCCTAACGGTCGGACAGAGCTTAATCACTAATGTTTGTATACCCCCAGAAGTCGCCGCCACGTGGCATCCATGCAGCCCTAAAAAAGAGCTGGAGTTAACCCAAGCTCATGACTCAATCGACTCCGACAATAGTCGCCGGAAACTTCTCGCCATGTCCCCTGTTAATGCCACTTTCCGCCGTGTCCTCGCCGCGGCCGGTGGATCCGACAAATGTGCTGAGAGGGGGAAAGTTCCGTTCGTGTCGGAAGGAGGAATCCATCAGCTGCATATATTCATCTTCGTATTGGCCGTTTTCCATGTTCTGTACTGTGTCTTAACTTTAGCTTTGGGTAATGCTAAGATGAGGAGCTGGAAGTCGTGGGAAAACGAAACGAGAACGGTCGAGTACCAATTTTCACATGATCCAGAACGATTCCGTTTTGCAAGAGACACGTCGTTCGGGCGAAGACATTTGAGTTTCTGGACCAAATCGCCCTTCCTCATGTGGATTGTTTGTTTCTTCCGACAATTTGTTCGGTCCGTTCCTAAGGTTGATTACTTGACTTTAAGACATGGTTTCGTCATGGCACACCTGGCACCGCACAGCGATCAGAAATTTGACTTTAGGAAATACATCAAGCGATCGCTGGAAGAAGATTTCAAGGTGGTTGTCAGTATCAGCCCACCCATCTGGTTCTTCGCTGTCCTCTTCCTGCTTTTCAATACCCACGGGTGGAGGGCTTATCTATGGCTGCCATTTGTGCCATTAATTATTGTGTTATTGGTGGGGACTAAGTTGCAAGTGATAATTACGAAAATGGGCCTGAGGATTCAGGAACGAGGGGAGGTGGTGAAGGGAGTGCCGGTGGTCGAACCGGGGGACGACCTGTTTTGGTTCAACCGGCCCCGGCTCATTCTTTATCTCATCAATTTTGTGCTCTTTCAGAATGCCTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTCGGGATGAAATCTTGTTTTCACGAGCATATCGAGGATTTGGTGATCAGAATAACGATGGGAGTCCTGGTTCAAATCCTATGCAGTTATGTCACGTTGCCTCTTTACGCGCTAGTCACACAGATGGGTTCGACGATGAAACCGACGATTTTCAACGATAGAGTAGCGACAGCGTTGAGAAACTGGCACCACACGGCTCGCAAACACATCAAGCAAAATCGGGGGTCGATGACGCCGATGTCGAGCCGCCCTGCTACACCCTCCCACCACATGTCACCAGTGCACCTTCTCCGCCACTATCGAAGCGAATTGGACAGTTTCCATACCTCTCCTAGAAGATCAAATTTCGACAACGACCAATGGGATCCAGACTCTCCTTCGCCATCGCACCATTTCCACCGTCGTCCTCTCGATGTCGAAGGCTCCAGTTCCCACAAACACCACTTCCATCGCAACATGGAGGTCGGCGAAGCCGATGTTGACAGGGATTCACCCCAAATTGACTCGACAACCCAGACTCCAAATTTGAATGCGAATAATAACTGTGAGCAGCACGAGATTGACGTGGGCCCGAAGGAATTCTCGTTCGATAGAAGAGTCGATGGAGTATGA 1791 49.47 MAGGGAGRSLEETPTWAVAVVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPEVAATWHPCSPKKELELTQAHDSIDSDNSRRKLLAMSPVNATFRRVLAAAGGSDKCAERGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWENETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLMWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFRKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMGLRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHIEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNDRVATALRNWHHTARKHIKQNRGSMTPMSSRPATPSHHMSPVHLLRHYRSELDSFHTSPRRSNFDNDQWDPDSPSPSHHFHRRPLDVEGSSSHKHHFHRNMEVGEADVDRDSPQIDSTTQTPNLNANNNCEQHEIDVGPKEFSFDRRVDGV 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2354140 2357084 + Carg03248-RA Car20g00418 168277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00418 596 MobiDBLite consensus disorder prediction 558 577 - -
Car20g00418 596 MobiDBLite consensus disorder prediction 500 596 - -
Car20g00418 596 MobiDBLite consensus disorder prediction 579 596 - -
Car20g00418 596 MobiDBLite consensus disorder prediction 500 557 - -
Car20g00418 596 Pfam Mlo family 8 493 IPR004326 GO:0006952|GO:0016021
Car20g00418 596 MobiDBLite consensus disorder prediction 460 484 - -
Car20g00418 596 MobiDBLite consensus disorder prediction 465 481 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00156 Car20g00418 CCT
Car13g00156 Car20g00418 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00811 Car-Chr18:9173318 Car20g00418 Car-Chr20:2354140 0 dispersed
Car07g00604 Car-Chr7:3053548 Car20g00418 Car-Chr20:2354140 4.44E-15 transposed
Car01g00490 Car-Chr1:2878200 Car20g00418 Car-Chr20:2354140 6.07E-168 wgd
Car13g00156 Car-Chr13:1378163 Car20g00418 Car-Chr20:2354140 0 wgd
Car17g00565 Car-Chr17:5237572 Car20g00418 Car-Chr20:2354140 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00418 K08472 - csv:101212018 1052.74