Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00437 ATGTGTATTTCATTGAGCATTTCAAAGCCCATTTCTCCATTTCGTTCAAATTTTGAGTTTCAAGCCGCCGTTTGGGCGAGAACCACACAAAGGGCTTGTTCTGCATGTTCTAAAACAGCTCCATTAGAACACCTGCCAAAGGTTTCATTTAGGAAGATCTTTATGGCTTTTGGTAGTTCTAAATCCGTTAGGTTCCAAGACACTCTTGAATCATCTACCTTGCCTGCTATCAATGGTGGCGGTGTGACGAAGATCGTATACAATATCGATGGCACACAAATACCGGATTCTAGCTGCAAGAGAACTGCATCTTCTGGGAAGTCTGGAAGATCATTAAGAGCTAAGGTTTTGTCTAGAGTTTTCTCAGAGGATTATGAGAGAGTTCAACGAAAAATATTGGATCCTAGAGGACAAGCGATAAGACGATGGAATAAGATATTTTTAGTTGCTTGTTTAGTCTCGTTGTTTGTAGACCCTCTTTTCTTTTACTTGCCTATGGTCCGGGACGAGGAGTGCATCGATATAGGAGTAGGTGTCGAAGTTGTCCTCACGACTATAAGATCGATAGCTGATCTTTTCTACACAATTCAGATTTTTGTTAAGTTTCGTACAGCTTATGTTGCGCCTTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGATCCTTGTAAGATAGCAATAAGGTATCTACGCCATGGTTTTTGGATCGATCTCATTGCAGCCATGCCAGTTCCTCAGGTACTGATTTGGATTGTCATCCCCAACCTTAGTGGTTCGACAATGACAAACACGAAGAACTTCCTAAGGTTCTTTCTCATATTTCAGTACCTCCCGAGACTTTTTCTCATATTTCCGCTCTCGACACAAATCGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACTTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCATGCTGGTACCTTCTTTCGATCGAGCGACAAGAAGCATGTTGGAGAAGACTTTGTACGGTTGAAAAATCTTGTAATGATGGATTCTTCGACTGTCATAAGGTCGATGACCCTCGAAGGGATTCGTGGTTTAATACGAGCAACATTAGAACTTTATGCAATCCAGATGATCCCTTTTATCAATTCGGTATATATGGCGACGCGATTACTTTCCATGTCACGACCTCTCCATTTTTCAACAAGTACTTCTATTGTCTTTGGTGGGGCCTGAAGAATCTCAGTTCTTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGTGAAATAATTTTTGCCATAATTGTAGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGAAATACCTCCAATCGACGACTGTTCGATTGGAAGAGTGGAGAATAAGAAGAACCGATACAGAACAATGGATGCATCATAGACAGCTACCTCCCGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGATAGCAACACGAGGCGTCGATGAAGAAGCCCTTCTTAGAAGCCTTCCCTTGGATCTCCGTAGAGACATCAAACGTCACCTTTGCCTCGACCTTGTTCGACGGCGTTCTGTATCGGATGCTGGGGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCCGATTTCTCCATTGTTGAGGAATGA 1671 42.79 MCISLSISKPISPFRSNFEFQAAVWARTTQRACSACSKTAPLEHLPKVSFRKIFMAFGSSKSVRFQDTLESSTLPAINGGGVTKIVYNIDGTQIPDSSCKRTASSGKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLVSLFVDPLFFYLPMVRDEECIDIGVGVEVVLTTIRSIADLFYTIQIFVKFRTAYVAPSSRVFGRGELVIDPCKIAIRYLRHGFWIDLIAAMPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCTVEKSCNDGFFDCHKVDDPRRDSWFNTSNIRTLCNPDDPFYQFGIYGDAITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWIATRGVDEEALLRSLPLDLRRDIKRHLCLDLVRRRSVSDAGVVSSLQKPEEPDFSIVEE 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2459197 2463178 - Carg03229-RA Car20g00437 168296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00437 556 Pfam Ion transport protein 143 461 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00648 Car20g00437 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00583 Car-Chr14:3167288 Car20g00437 Car-Chr20:2459197 3.37E-165 dispersed
Car20g00437 Car-Chr20:2459197 Car12g00767 Car-Chr12:7356547 1.55E-156 dispersed
Car02g00648 Car-Chr2:4882037 Car20g00437 Car-Chr20:2459197 9.91E-07 wgd
Car20g00437 Car-Chr20:2459197 Car03g01110 Car-Chr3:8957918 3.96E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00437 K05391 - csv:101210775 905.975