Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00470 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTCACGAGTATAGGCATGTGGTGCTCCCACCCGACGTGGCAAAGTTGCTTCCTAAGAATCGCCTGCTTTCTGAAAATGAGTGGCGTGCACTTGGAGTTCAGCAGAGTCGTGGATGGGTGCACTATGCTATTCATCGTCCCGAGCCACATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAAAACGCTTGGGAATTTGTACCACTTCAGCGAACTGCTTGCATATCAGAACTTGTGGAGGATCAGACCCCATGA 321 50.16 MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNAWEFVPLQRTACISELVEDQTP 106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2605637 2607208 - Carg03196-RA Car20g00470 168329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00470 106 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car13g00200 Car20g00470 CCT
Car02g01152 Car20g00470 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00200 Car-Chr13:2257626 Car20g00470 Car-Chr20:2605637 1.56E-49 dispersed
Car02g01152 Car-Chr2:7913276 Car20g00470 Car-Chr20:2605637 1.01E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00470 K02219 - egr:104421234 166.392