Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00496 ATGGGGAGCTGTTTGTCTAGTGGCAATCAGAGTAGTTGTAATGGTGGAAGCAATGGAGAGGGAGTTTTTGAATCCTGTTTGGGGAATGGAGTTTGTGGTCGGATTGAAAGAAACAGAACATTCTCAGATCATGTTTTCTCTTTGCAGCATTTGAATTCTGTACCTAATAGACTTGTTTATAATGGGAAGACTTCGAATTCTTGCATTTTCACTCAACAAGGTCGAAAGGGTATTAACCAGGACGCCATGGTTGTATGGGAAGACTTCATATCAGATGGTGCGATTTTCTGTGGCGTGTTTGATGGTCACGGTCCACACGGTCACGTAGTTGCACGAAAGGTTAGAGATGTTCTGCCAAGAAAGCTTGTGTCATTCTGGCAGTCGTCTCAGTTGAAGCATGATAGATCGGATAGAACTTCTTGTCTTGCGTGGAGTCGAAAGAATTCAGCAGATGGTGAAGGACAGGACGTAGATGGCTCACAGGAGGACAGATCAAGTTCTTTATGGAGAAGAACTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAATCTGATCCCAAATTGGATTGTTTCTGTAGTGGCTGTACTGCCATCACTCTAGTGAAGCAGGGCTCGGATCTATTCGTGGGAAGTATTGGGGATTCTCGAGCGATTCTTGGATCGAAAGACAGCAGTGATTCTCTTGTAGCAACACAATTAACAGTAGATCTAAAGCCCGATCTACCCAGAGAGGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTGTTTGCATTGCATGATGAACCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAACGCTCCGGGATTAGCCATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCCGAGTTCTCACACCGTGCGCTTACAGATAATGATCTGTTTGTTGTTCTTGCTTCAGATGGCGTTTGGGACGTATTGAGCAACGACGAGGTGGTTGAGATAGTTTATTCTGCCTCGACTCGGTCATCGGCAGCTCGAATGGTGGTAGACTCGGCTGCTCGGGAGTGGAAGCTCAAGTACCCTACTTCGAAAATGGACGACTGTGCAGTCGTTTGCCTGTTCTTGGATGGGAAAATGGATTCAGAGTCAGAAAATGAAGAACAAGCTTCTTGTGCAACTCTTGAATCCAATCAAATGAGTAACACAGAATGTTCAGATGAAGAGCAGAGGTCTGGTGAGCCGAGTTTGCAAAGGAATTATACGGTTCGATCGTCGGAAGAAAAGGACCGAATTGGGGGATTATATTCACATAGTGAAGAGAATGAAGAATCAATGTCTGCTGAAGATGAGAATTGGCTGGGACTGGATGGTGTAACAAGAGTAAACTCTTTGGTTCAACTTCCTAGATTTTCTTGA 1410 44.61 MGSCLSSGNQSSCNGGSNGEGVFESCLGNGVCGRIERNRTFSDHVFSLQHLNSVPNRLVYNGKTSNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHDRSDRTSCLAWSRKNSADGEGQDVDGSQEDRSSSLWRRTFLKSYKAMDKELKSDPKLDCFCSGCTAITLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRALTDNDLFVVLASDGVWDVLSNDEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESENEEQASCATLESNQMSNTECSDEEQRSGEPSLQRNYTVRSSEEKDRIGGLYSHSEENEESMSAEDENWLGLDGVTRVNSLVQLPRFS 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2748724 2751451 + Carg03170-RA Car20g00496 168355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00496 469 MobiDBLite consensus disorder prediction 420 435 - -
Car20g00496 469 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Car20g00496 469 MobiDBLite consensus disorder prediction 384 448 - -
Car20g00496 469 MobiDBLite consensus disorder prediction 384 403 - -
Car20g00496 469 Pfam Protein phosphatase 2C 161 350 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01556 Car-Chr11:12414585 Car20g00496 Car-Chr20:2748724 0 dispersed
Car17g00548 Car-Chr17:5108119 Car20g00496 Car-Chr20:2748724 1.98E-134 dispersed
Car19g00768 Car-Chr19:8444350 Car20g00496 Car-Chr20:2748724 0 wgd
Car02g00099 Car-Chr2:637029 Car20g00496 Car-Chr20:2748724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00496 - - cmax:111469610 790.415