Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00517 ATGGAATTGAGAAGAGGCGGTTATGTGGGTGGTTTAGTGATTCTCCTCTGTGCATTGGCAATTGTGAGCTCAGAGGGCAGGAGGAAGACGTTAGAAATGGTTATCGCCAATGCCGGCGATTGCCATTTCACATCCTCAGAGTTGGAAGGAGCTATGGGCAAGAAGGCATGCACGAAACAATTTGTTCCTTGCATCCAGAAAGAAACCATGGATAAATCTATAGCAATTCTACCTCCTGAAATGAAACATGGCTTGTTGGATTGTTTAAGAAAGAGAAGTATGTTTTCTCGTGATTCTGAACTTAGTCCTCCTAGCTTATCTGATTGGGTTAGGAGATCAATTGAGTTCATTTTCGTAGAGTCCAATATTCACATGAGACAATTAATTAGATTGTTTCAAGGTTCATCACCACCGCACCCTACTGCAGCTCCAGCTCCATCTCCTGATGCAGAATCACCGGCTAATTCTCCATTACTGTCGCCCATTCATGCTCCAATGTTGTCGCCGAGTAATGCACCGACCAATTCTCCTCCTGTCGTGGCCCCGGCGCCGTCGCCAGAACTGCTACCGCCAGTGGACGACACTGATGTTTTGGATTCACCTCCATCTACTGTGGCTCGCTCACCATCTCTCCCACGAGCTTCTCCCAAGTCTCGCCCGCCAAAGAAGCATGAAGAAAGCCAGACGGGCATAATTGCTGGTATTGTAGCAGCTGGTGTGGGAGTTGTTCTTGTGGTTGCGCTGGTGTTGTTCTGCTGTCGGAGAGGTAAGGGAAGTAGGGTTGAGCCGAAGGATGGGCAAAAGAATGAGAAGCCTTTAAACAACATATCTTTGAGTGAATTACCAGCAGGTTCTTCACTGAAGGCATACAGCGATGGAAATCCAGCAATCAACGCTAATAATGGAACTAAACCACCACCCTCTTTTGTTGGCAACTTAGCAGTGAATCCTGAAAACCATACCTATATGGCCGAGGCTCCAACATCTGATGGTAAATCATCAGCAATGCCGCCTCTAAAACCCCCTCCTGGAAGACCAGATGCTCAGCCTCCTCCTCCAACAGCACCTGCTGCGACACCTCCACCCCCTCCGCCTGCACCCAGAGCTCCACCACCATCACCCCCGAAAGTATCTCGGCCCCCACCTGCACCACCGGCGGGAATCCCTGGTAAACCTCAAGCACCACCTGTGGCGCCACATCAGGGTGGACCCAATGGCTCAAGTATGGATCCTGATTCATTAGGCCATAGAACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCTTGCCAACCCTGGACATTCCATGGTCTGGCACGAGATTAGTGATGGATCATTCCAATTCAATGAGGAGATGATGGAGTCCTTGTTTGGATATGCAGCAGTGGAAGCTAACAAAGGCAACCGCAAGAAAGATTTAGCTTCGGAACCTTCAGTACAGTACATTCAAATCATCGACCCTAGGAAAGCTCAAAACCTTTCAATTCTCCTACGGGCACTGAATGTGACAACAGAAGAAGTTGTGGATGCTATTCAACAAGGCAATCTCTCTGTTCTTAGAATAAAATCTACAATTGGTTTAATTCATGAAACTAACAGAGGGTTTATAACAAATTATGTACCAGGAAATCCTGATCTTCCAGCAGAGCTTATGCAGACCTTGTTGAAGATGGCACCAACAGCAGAAGAGGAGCTGAAACTGAGATTATATTCAGGGGATCTTTCTCAGCTAGGTCCAGCAGAACGGTTCCTGAAGGTGTTGGTGAACGTTCCTTTTGCTTTTAAACGATTGGAGTGCCTTCTCTTCATGCTCTCATTGACGGAAGATGTCGCTAGCATTAAGGAGTCGTTTGCTACGCTGCAGGCAAGTATTTTCAAATCCAAAATCAAACACAATCACTTTATGAAACACAGCATAAACAGCAGGCTATTTTTCAAGCTACTAGAAGCAGTTCTCAAAACTGGCAATCGTATGAATGTCGGGACGTACCGTGGCGGTGCTCAGGCGTTCAAGCTCGATACGCTCTTGAAACTGGCGGATGTTAAGGGAACCGACGGCAAAACTTCGCTCTTACATTTTGTCGTACAGGAGATTATTCGTTCGGAGGGCAGTCGAGCAGCCCGCTCTAATAGACATAGCCGGAGTTCGTCCAGTATAGTTTCCAACGATACGGTTTCCGAAGACGTCGTCGACAGTTCTGTGGAGCATCATCGGCGATTAGGTCTTCAGGTCGTTTCTGGTTTGAGCACGGAGCTCCAGGACGTTAAAAAAGCGGCCGCCATAGATGCGGAAGGGCTAACGAAGACGATCTCGAAACTCGGCCAGTCTCTGCTTAGAACCAAAGGATTTATAAGCGCGGAGATGGAAAGTTTGGACGAAGACATCCAATTCCACCAATCGGTGACGAAATTTGTGGAAGGAGCAGAAGCGGACATTTCGTGGATTGCAGAGGAAGAAAAGAGGATAATGGCACTGGTGAAGAGAACGGTGGATTACTTCCATGGAAATTCTGGAAAGGACGAAGGATTGCGATTGTTCACGATCGTACGCGATTTCCTGAATGTGTTAGACAAGACCTGTCAACAGGTCGAAGAAGAAGCTGCAGCTGCGGCAAAGCAAGCAAAGAATTCCAAAAAAGAAACTCCAACATCGTCGCAGCGGCTATTTCCAGCGATTGCAGAACGCCGGGTGGGCGAGGACTCAAGTTGTTCGGACGACGACGACGATGGCAAGAGTTCATCATCATCAGCAGCAGCAGACTAG 2763 47.77 MELRRGGYVGGLVILLCALAIVSSEGRRKTLEMVIANAGDCHFTSSELEGAMGKKACTKQFVPCIQKETMDKSIAILPPEMKHGLLDCLRKRSMFSRDSELSPPSLSDWVRRSIEFIFVESNIHMRQLIRLFQGSSPPHPTAAPAPSPDAESPANSPLLSPIHAPMLSPSNAPTNSPPVVAPAPSPELLPPVDDTDVLDSPPSTVARSPSLPRASPKSRPPKKHEESQTGIIAGIVAAGVGVVLVVALVLFCCRRGKGSRVEPKDGQKNEKPLNNISLSELPAGSSLKAYSDGNPAINANNGTKPPPSFVGNLAVNPENHTYMAEAPTSDGKSSAMPPLKPPPGRPDAQPPPPTAPAATPPPPPPAPRAPPPSPPKVSRPPPAPPAGIPGKPQAPPVAPHQGGPNGSSMDPDSLGHRTKLKPFFWDKVLANPGHSMVWHEISDGSFQFNEEMMESLFGYAAVEANKGNRKKDLASEPSVQYIQIIDPRKAQNLSILLRALNVTTEEVVDAIQQGNLSVLRIKSTIGLIHETNRGFITNYVPGNPDLPAELMQTLLKMAPTAEEELKLRLYSGDLSQLGPAERFLKVLVNVPFAFKRLECLLFMLSLTEDVASIKESFATLQASIFKSKIKHNHFMKHSINSRLFFKLLEAVLKTGNRMNVGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLHFVVQEIIRSEGSRAARSNRHSRSSSSIVSNDTVSEDVVDSSVEHHRRLGLQVVSGLSTELQDVKKAAAIDAEGLTKTISKLGQSLLRTKGFISAEMESLDEDIQFHQSVTKFVEGAEADISWIAEEEKRIMALVKRTVDYFHGNSGKDEGLRLFTIVRDFLNVLDKTCQQVEEEAAAAAKQAKNSKKETPTSSQRLFPAIAERRVGEDSSCSDDDDDGKSSSSSAAAD 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2854019 2857158 - Carg03149-RA Car20g00517 168376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00517 920 MobiDBLite consensus disorder prediction 258 415 - -
Car20g00517 920 Coils Coil 853 880 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 270 284 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 171 189 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 898 913 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 705 724 - -
Car20g00517 920 ProSiteProfiles Formin homology-2 (FH2) domain profile. 410 882 IPR015425 -
Car20g00517 920 Pfam Formin Homology 2 Domain 417 856 IPR015425 -
Car20g00517 920 MobiDBLite consensus disorder prediction 710 724 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 291 307 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 868 920 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 134 227 - -
Car20g00517 920 MobiDBLite consensus disorder prediction 336 399 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00124 Car20g00517 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00567 Car-Chr16:3586045 Car20g00517 Car-Chr20:2854019 5.21E-167 dispersed
Car02g00124 Car-Chr2:737857 Car20g00517 Car-Chr20:2854019 0 wgd
Car20g00517 Car-Chr20:2854019 Car09g00837 Car-Chr9:5101705 2.38E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00517 - - cmos:111449007 1328.54