Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00522 ATGAGAATGGGGAGGCTTACTTCTTTGGTGTTGGCCGCTATTGTTGGTCTTCTAGGCCTCATAGGCTCCACTCAAGCTCAGTTACAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTGGATTTCGTTCATCAGCATATCCATAATGCCCCTTCATTGGCAGCAACTTTCATAAGAATGCACTTCCATGATTGCTTTGTTAGGGGTTGTGATGGGTCTGTGCTTATAAACTCCACTTCAAATAACCAAGCTGAGAAGGATTCTCCTCCAAATCTAACACTTAGAGGGTTTGACTTCATTGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTGGTACTGTTCGAAGATCAAGGCCTTGATCTGAAAGACTTGGTATTACTATCTGGCGCTCACACAATCGGTATAGCGCACTGCTCATCATTCAGAAACCGATTGTACAATTTCACCGGCGTGGGAGACCAAGATCCCTCTCTGGACCCAAGATACGCCGCTAACCTGAAGGCCAACAAATGCAAAACTCCGACCGACAACAGCAAGGTGGAGATGGACCCTGGAAGCCGCAACACTTTCGACCTTAGCTACTACTCTCTTCTTCTCAAGAGAAGGGGCCTTTTCGAATCCGATTCTGCTCTCACTAAAGGCGCAACGACCTTGAGTCTAGTTCAGAAACTTGTTCAAGGACCCATTGAAGAGTTCTTCTCTGAATTTGCAGCATCCATTGAGAAAATGGGACGGATTAAAGTGAAGACTGGAACTGAGGGTGAAATCAGAAGGAGATGCGCCGTCGTGAATGGTTGA 822 46.23 MRMGRLTSLVLAAIVGLLGLIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINSTSNNQAEKDSPPNLTLRGFDFIDRVKSLLEAECPGVVLFEDQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDSALTKGATTLSLVQKLVQGPIEEFFSEFAASIEKMGRIKVKTGTEGEIRRRCAVVNG 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2881603 2883233 - Carg03144-RA Car20g00522 168381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00522 273 ProSiteProfiles Plant heme peroxidase family profile. 27 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00522 273 Pfam Peroxidase 46 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00522 273 Pfam Peroxidase 121 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car20g00522 273 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Car20g00522 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 131 141 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00522 Car-Chr20:2881603 Car19g00213 Car-Chr19:2057936 1.50E-61 dispersed
Car11g01524 Car-Chr11:12264702 Car20g00522 Car-Chr20:2881603 7.48E-47 wgd
Car02g00133 Car-Chr2:772945 Car20g00522 Car-Chr20:2881603 5.87E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00522 K00430 - csv:101213629 453.366