Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00530 ATGGAGAGCCTATTAGTTCTTACACTGATTAGTTCGATATGGGTATTTCTTGCTGGTTCTGCATGTTGCCAAAGGCCCGCGGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCCATTATAGGAAGAGCGGCGAAGGTGGCAATGGAAGCTGCAGTTTCGGATGTGAATGCAGATCCTTCCATTCTCAATGGAACAAGGCTAAATTTGATCATGGCAGATACACATTGCAATGTTCTCTTGGGTTCTATTCGAGCTTTCCAGGTTCTTGAGAAAGACGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATCATCTCCAAGTGCCACTTATATCATACGCTGCCACTGATCCAACTTTATCTGCCCTCCAATTCCCCTTTTTCCTACGGACTACTCAGAGTGATGCCTATCAAATGACTGCCATGGCAGAATTAATTGACTTTTATGAGTGGAAGGAAGTGATCATTATCTTTGTGGATGATGATTATGGAAGAAATGGAATGTCCACTTTAACTGATGAACTTGACAAGAAGATGTTTAAAGTTTCTTACAAACTACCCTTACCTTCTCAGTTGAATCTCAGTGAAATCACAGACATGCTCAATAAATCCAAGTTGCTCGGTCCTCGAGTCTATGTTGTTCATGTTAATCCTGATCCTAGATTAAGCATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTTCTACCTTAGATTCTATTCTGCCCGTACACCAAACCTCTCTAAACATCCTTCAAGGAGTGGTTGTACTTCGTCAATATACGCCTGAATCCAGCCAAAAAACAACATTATGGTCTCGTTTAAGGAAGATGCTGCCAGAAGACTCGAGAAATTCTTCGATGAATGTCCATGCTCTTAGTGCCTACGATACCATTCATGTAGTTGCACGTGCGATCGATAAGTTTCTAAATGGAGGTAGGAGCATTAGCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGCCCTGGGGGAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAAGCAAACTTTACTGGTTTAAGTGGTCGGATTGAGTTTAATTCAGATCGAAACATTGTCAGTAGAGGCTATGAGGTGATCAATATTGATCGGACGGGATTGCGTCGAGTTGGTTATTGGTCCAATGGCACAGGCTTTACTATCCAATCCCCAGAAGCTCTGAAACAGAAACGAATTACTTATACCCACCTGAACCAGACTCTTGGCAATGTTACCTGGCCTGGTGGAAAGACAGAAAGACCGCGTGGATGGGTGATTGCAGACAATGAAAGACCATTAATAATTGGAGTGCCACGCAGAGTAAGTTTCATTGAATTTGTTACAGCAGTCAATGGAAGCCACAAAAACATTCAAGGATACTGTATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCCTACGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTACTCCAATCCTAGCTATGATGATCTTGTGAAGAACATTGCAAATGGTGTCGTGGATTTTTCTCAGCCTTTTGCTTCTACTGGCCTTGTTATTGTGGCTCCAATAACAAATTCAAAGTCGAATGCTTGGGTGTTCCTCAAACCATTTACAGTCGAGATGTGGTGCGTTACCTCAGCCTCCTTCTTCATGATTGGAGCAGTCATATGGCTTCTCGAGCACCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGGCAGCTAGTGACAGTTCAGCTTCTCAACATTGTTCAAAACAAATCCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTCGTACCCCTAGGTTCTCCAGAAGAATATGAATCAGCATTGCTCAAAGGGCCATTCAAGAGAGGAGGGGTGGCGGCCATTATTGATGAACTTCCATATATGGAACTATTTTTATCAGGGAGGAACGATTTCGGAATGATCGGACAACCGTTCACCAAGAGTGGATGGGGATTTGCTTTTCAGAGAGGATCTCCACTTGCGGTAGACATTTCAACTGCAATTCTAAAGCTTTCTGAGAATGGAAAACTTCAGAAGATCCATGAGAAGTGGTTCTGCAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAACCTGAGCCTAACCAACTTCACTTGGTTAGCTTCTGGGGTCTATATCTGCTGTGCGGTGCCTTCTCACTCGTGTGTCTTTTTATATTTTTGTTTCGCATAGTTCGACAATTCGCTCGCTACATACGACAACAGAAGGAATCATCTCATGCAGAATTAGTGTCATCAAATTCAAACTCGAACTGGACTCAGGTTGTATACAAGTTTTTCGACTTCGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTTTCGAAAGCATGA 2463 42.27 MESLLVLTLISSIWVFLAGSACCQRPAVVNIGAVFTFDSIIGRAAKVAMEAAVSDVNADPSILNGTRLNLIMADTHCNVLLGSIRAFQVLEKDVVAIVGPQSSVVAHMVLQIANHLQVPLISYAATDPTLSALQFPFFLRTTQSDAYQMTAMAELIDFYEWKEVIIIFVDDDYGRNGMSTLTDELDKKMFKVSYKLPLPSQLNLSEITDMLNKSKLLGPRVYVVHVNPDPRLSIFKIAHQLDMMTSDYVWLATDWLSSTLDSILPVHQTSLNILQGVVVLRQYTPESSQKTTLWSRLRKMLPEDSRNSSMNVHALSAYDTIHVVARAIDKFLNGGRSISFSLKNKFHDLNTSRMPWGKLKIFDDGALLLSILLQANFTGLSGRIEFNSDRNIVSRGYEVINIDRTGLRRVGYWSNGTGFTIQSPEALKQKRITYTHLNQTLGNVTWPGGKTERPRGWVIADNERPLIIGVPRRVSFIEFVTAVNGSHKNIQGYCIDLFNEARKLVPYDVPYRFIPFGNGYSNPSYDDLVKNIANGVVDFSQPFASTGLVIVAPITNSKSNAWVFLKPFTVEMWCVTSASFFMIGAVIWLLEHRVNDDFRGPPKRQLVTVQLLNIVQNKSYLTESLYLPRSRLVPLGSPEEYESALLKGPFKRGGVAAIIDELPYMELFLSGRNDFGMIGQPFTKSGWGFAFQRGSPLAVDISTAILKLSENGKLQKIHEKWFCKMGCPGERRRKPEPNQLHLVSFWGLYLLCGAFSLVCLFIFLFRIVRQFARYIRQQKESSHAELVSSNSNSNWTQVVYKFFDFVDEKEEAIKRLFSKA 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2921825 2927344 - Carg03136-RA Car20g00530 168389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00530 820 Pfam Receptor family ligand binding region 46 404 IPR001828 -
Car20g00530 820 Pfam Bacterial extracellular solute-binding proteins, family 3 536 722 IPR001638 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00139 Car20g00530 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00140 Car-Chr2:815991 Car20g00530 Car-Chr20:2921825 0 dispersed
Car11g01517 Car-Chr11:12219952 Car20g00530 Car-Chr20:2921825 0 dispersed
Car20g00529 Car-Chr20:2910769 Car20g00530 Car-Chr20:2921825 7.25E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00530 K05387 - csv:101215715 1122.07