Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00551 ATGGGGATATCAATGAACTTAGTGACATATTTAGTTGGGGATTTGCATCTCTCTTCAGCTAAATCTGCAACTATTGTGACTAATTTTCTTGGTGCCCTTAATCTTCTTGGCCTTCTTGGTGGGTTCTTAGCAGATGCCAAGTTGGGACGTTATCTAACTGTTGCAACTTTTGCTTCCATAACTGCTGTGGGTGTTATTTTGTTGACATTGGCCACAACCATCCCTGGCATGCGACCCCCTCATTGTGATGACTCCAGAAGGCAACTTCATCAATGCATTGAAGCTAATGGTGGGCAACTTGCCATGCTCTATGCAGCACTTTATACTATAGCACTCGGCGGAGGGGGGATAAAATCGAACGTTTCAGGATTTGGGTCCGACCAATTCGATGTCAATGATCCTAAGGAGGAGAAGGCCATGATATTCTTCTTCAATAGGTTCTACTTTGCCATAAGCATTGGATCCTTGTTTGCTGTCATTGTGTTGGTTTATGTACAAGACAATGTTGGGAGAGGCTGGGGATATGGAATCTCTGGAGGGACCATGGTGATTGCTGTGATTGTACTGCTTTGTGGGACAACCTTTTACAGGTTTAAGAAGCCTAGAGGAAGTCCTCTAACAGTGATATGGAGGGTGGCTCTTTTGGCTTGGAAGAAGAGAAGTCTCCCTCTCCCATCTCATCCCAGCTTCTTAAATGACTACCAAAATGCCAAGGTTCCTTACACCTACAGGTTCAAGTGTCTTGACAAGGCTGCAATTCTGGACGAGTATGTTGCCAACGATCGAAACAGAAACGATCCATGGATTGTCTCGACCGTGACTGAAGTTGAAGAAGTGAAAATGGTGCTGAAGCTTTTACCTATTTGGTCTACTGGCATCCTCTTTTGGACGATCTACTCTCAAATGACTACGTTCACGGTAGAGCAAGCATCATTTATGGATAGAAAAGTTGGTAGTTTTGAGATTCCTCCTGGTTCTATGTCAGCCTTTCTATTCATCACCATCCTTCTCGTCACTTCCTTGAACGAGAAACTATTCATACCAATTGCACGAAAGCTGACTCACAATGCCCAAGGTCTCACAAGCCTTCAGAGGATTGGAATTGGACTTGTTTTCTCAATTTTTGGCATGGTGGCTGCTGGAGTTGTTGAGAAAGAGAGGAGGACATTAGCTTTGGGACAACGTACTCTAAGTGCTTTCTGGTTAATACCTCAGTTCTTCTTGATTGGTGCTGGAGAGGCATTTACATATGTTGGACAACTCGAGTTTTTTATCAGAGAAGCACCGGAACGAATGAAATCCATGAGCACAGGGCTTTTTCTTAGCACTCTTTCCATGGGATTTTTCGTTAGTAGCTTGTTGGTAACAATCGTGGATAAAGTAACCAACAAGCAATGGCTGAGAAGTAATTTGAACATGGGAAACTTGAACTACTTCTATTGGCTACTTGCAGTGTTGGGGCTGCTAAACTTTTTCTTCTTTCTAGTCCTAGCCCGGAAACATCAGTATAAAGACCAGCATTACTTCAACTCTAAAGACAACAATGAGGAGCTCAAGAGTTCTAATGACTTGGTAGCACTTGAAGTGGAAGGGCCAATAAGCATAAAGGCAACAGAAAGTTAA 1623 43.19 MGISMNLVTYLVGDLHLSSAKSATIVTNFLGALNLLGLLGGFLADAKLGRYLTVATFASITAVGVILLTLATTIPGMRPPHCDDSRRQLHQCIEANGGQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDVNDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISGGTMVIAVIVLLCGTTFYRFKKPRGSPLTVIWRVALLAWKKRSLPLPSHPSFLNDYQNAKVPYTYRFKCLDKAAILDEYVANDRNRNDPWIVSTVTEVEEVKMVLKLLPIWSTGILFWTIYSQMTTFTVEQASFMDRKVGSFEIPPGSMSAFLFITILLVTSLNEKLFIPIARKLTHNAQGLTSLQRIGIGLVFSIFGMVAAGVVEKERRTLALGQRTLSAFWLIPQFFLIGAGEAFTYVGQLEFFIREAPERMKSMSTGLFLSTLSMGFFVSSLLVTIVDKVTNKQWLRSNLNMGNLNYFYWLLAVLGLLNFFFFLVLARKHQYKDQHYFNSKDNNEELKSSNDLVALEVEGPISIKATES 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3042879 3045757 - Carg03115-RA Car20g00551 168410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00551 540 Pfam POT family 51 464 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car19g00816 Car20g00551 CCT
Car11g01561 Car20g00551 CCT
Car11g01561 Car20g00551 ECH
Car19g00816 Car20g00551 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01013 Car-Chr16:8623372 Car20g00551 Car-Chr20:3042879 5.66E-176 dispersed
Car20g00551 Car-Chr20:3042879 Car06g00217 Car-Chr6:1269389 6.72E-148 dispersed
Car02g00158 Car-Chr2:917576 Car20g00551 Car-Chr20:3042879 1.09E-95 transposed
Car02g00157 Car-Chr2:916051 Car20g00551 Car-Chr20:3042879 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00551 - - csv:101210968 947.192