Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00557 ATGCCGAAGGGTTTGAAGAGTAAATGTCATTCTACGTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGATCTTCAAGGGATATTCACTAATCTTCAAAATGCACGAAAGGAGAGTCGTACTACTGATATTGCTGTCTTGGAGGAGCAAGTCCATCAAATGCTTAGGGAGTGGAATGCTGAGCTTAATGAACCCTCACCTTCCTCTTCATTTGTTGAGGGTAGTCTTGGATCGTTCTCGCAAGAACTAGCCCATCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACAATGGCTGAACCAAAGACTGAGCCTGAACTCCATTGCGTTCTTGCCAGCAAACCGTCAAATTTTGTTCAGGATAGTTTTGGTTTTCCGGAGCTCCAACAGCATAGTTTTCTAGGATTTGAAGAGTGCCAAGTCTCTTCTCCAGTTCTACAGAATTATTCATTTTACAAATCTGACATGGCTACTCAGCCTAATTGTCAAAGTTTCGAAGTAGATAAAAACTTTGAGCAGAACACGATAGTCAGTAAGGATGATGTGTCTACTTTGGATTGCCATGCATTGAATTCACATCAAGAATTCGACTATGGGGTTCTTGTTGGGCCATATGATGCGGGAGACTTTAGTCAGGACACAAAGTCCGGTATTCTCCCAACTATCTCACCCCCACCGTCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGCCTGGACTATTGCAGTAGTTGTCATTCTGTTCTTGCAATGAATGAAGGCCTTCCAGGAATGACTCCAATATTGCGCCCTGGAGGCATTGGCTTAAAGGATGGTCCATTGTTTGCTGCTCTTCGTGCAAAGACACGGACCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCCCCATGGAATGCTCCTGAGCTTTTTGATATTTCGTTTCTTGAGGGGGAGACAATCAGGGAATGGCTCTACTTCGACAAGCCTAGACGGGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAGTTCGGTGGTCAGAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCTCTCTTGAATGGCATTTGTACGAATACGATATCACAGATTATGATTCATTCGCATTATATAGGCTGGAACTCAAGCATGCTGATGCAAAGAAGAGTCCAAAGGGAAAACTGACAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGGCCTGTTGAGCTTGGACAACTTATTAAAGCTAAGAGTACGAGTACGACGATGGCGAATAATAAGGCTGATAATGTAAGTATCAATCTTTCTCCACATAATCAGAATATGTCTAACACTAACTGA 1464 43.72 MPKGLKSKCHSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDIAVLEEQVHQMLREWNAELNEPSPSSSFVEGSLGSFSQELAHLLEHCDEQDDATSTMAEPKTEPELHCVLASKPSNFVQDSFGFPELQQHSFLGFEECQVSSPVLQNYSFYKSDMATQPNCQSFEVDKNFEQNTIVSKDDVSTLDCHALNSHQEFDYGVLVGPYDAGDFSQDTKSGILPTISPPPSAFMGPICALWDCFRPAQGSKWCLDYCSSCHSVLAMNEGLPGMTPILRPGGIGLKDGPLFAALRAKTRTKEVGIPICDGAATRKSPWNAPELFDISFLEGETIREWLYFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDITDYDSFALYRLELKHADAKKSPKGKLTADPLADLQKKMGRLTAEGPVELGQLIKAKSTSTTMANNKADNVSINLSPHNQNMSNTN 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3061332 3064410 - Carg03109-RA Car20g00557 168416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00557 487 Coils Coil 18 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01162 Car-Chr3:9272624 Car20g00557 Car-Chr20:3061332 3.00E-177 dispersed
Car20g00557 Car-Chr20:3061332 Car07g00603 Car-Chr7:3049951 0 wgd
Car20g00557 Car-Chr20:3061332 Car07g00179 Car-Chr7:1027515 4.31E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5375 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00557 - - csv:101211467 835.869