Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00574 ATGCCAGATGAAAATTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACAATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGAATTGAGGTTGCTTGGAATCAGGTTCGATTGAGAAATTTTAGTGGGGATCCAATGTTCATTAACCGCTTGAGGTCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAATATATAATTGTTTGTTACAGTGTTTGGAATGATGATGAGCATAAGACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGGGAATATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAACAGGTACTCGAGGGATTGGATTATCTTCATACTCACGAACCTTGCATTATTCACAGGGACCTCAACTGCAGTAACATATTTGTCAATGGTAACATTGGGCAGGTTAAAATAGGCGATCTAGGTCTTGCAGCTATAGTTGGCAGGAGTCATGCTGCACATTCAATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAAGAAGACTACACAGAGATGGTGGATATATACTCCTTTGCGATGTGTTTGCTCGAGATGGTTACAATGGAGATACCATACAGTGAATGTGATAGTGTTGCGAAAATATTCAGGAAGGTGACAACTGGAATAAAACCCCAAGCATTAGACAAAGTGACTAATGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAACCAAGAGCAAGGCCTTCCGCTTCCGAACTTCTCAAGGATCCCTTCTTTGACGAAGTTGGGGATGAAGATTCTGAGCAGTCTTAA 888 42.12 MPDENSIPFDRDAEPFVEVDPTGRFGRYNDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPMFINRLRSEVQLLSTLNNKYIIVCYSVWNDDEHKTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIFRKVTTGIKPQALDKVTNDEVRAFIEKCIAQPRARPSASELLKDPFFDEVGDEDSEQS 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3222624 3225330 - Carg16094-RA Car20g00574 168433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00574 295 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00574 295 MobiDBLite consensus disorder prediction 271 295 - -
Car20g00574 295 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01464 Car20g00574 CCT
Car19g00676 Car20g00574 CCT
Car19g00676 Car20g00574 ECH
Car11g01464 Car20g00574 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00715 Car-Chr6:4444370 Car20g00574 Car-Chr20:3222624 1.64E-165 dispersed
Car20g00574 Car-Chr20:3222624 Car18g00187 Car-Chr18:1022231 6.39E-120 dispersed
Car16g00906 Car-Chr16:7419118 Car20g00574 Car-Chr20:3222624 8.72E-167 wgd
Car20g00574 Car-Chr20:3222624 Car07g00623 Car-Chr7:3138823 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89614 PF00069 Pkinase 5.70E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00574 K08867 - csv:101222153 577.015