Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00592 ATGGAGGACAAGCGAGGTATCAGCAGCAACAAGCCAACCGAAAAATGGATGGCATTTGACAGAGAATCAAACACAACAAACACTCCTGGAAATGAAGCAAAAGTAGACAGAAAAAGCTGGCAAGCTTCTGCCACAGGGGCAATATCAACAGAAGCAATCATAGCAGAGAGGGCGGCGGAGTGGGGACTGGTGGTGGAGACGGACGTGGAAGAGGGAAGTTTCAAGGCCGTTGGGAGAGCATCAGGGGAAGGAGGGGGCAGCAAAAGATTATCAGAGAAAATCAGTGTCACAGAAAGAACATCAAGCTTTGGCAATGAAACTTCTGGAGTTTTTCCAAGGGCATCACAAGAGTTGAAGGATGCTTTGTCTTCTTTGGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGAGTGTCCCATCGTGTATGCGAGCAGTGGATTCTTTGGCATGACTGGTTATGCTTCAGAGGAGGTCATTGGAAAGAACTGTCGTTTTCTTCAGGGACCAGAAACGGACCAGAAAGAAGTTGACAAAATTCGATATGCAGTGAAAAATGGCAAAAGCTACTGCGGAAGGCTCTTGAACTACAAGAAGAATGGCACTCCTTTCTGGAATCTGCTGACAGTCACGCCTATCAAGGATGACAATGGCAATACTATCAAATTTATTGGGTTTGATTTCTTCTTCATCTTTTGA 699 45.49 MEDKRGISSNKPTEKWMAFDRESNTTNTPGNEAKVDRKSWQASATGAISTEAIIAERAAEWGLVVETDVEEGSFKAVGRASGEGGGSKRLSEKISVTERTSSFGNETSGVFPRASQELKDALSSLEQTFVVSDATKPECPIVYASSGFFGMTGYASEEVIGKNCRFLQGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNGNTIKFIGFDFFFIF 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3316494 3326696 - Carg16112-RA Car20g00592 168451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00592 232 MobiDBLite consensus disorder prediction 1 40 - -
Car20g00592 232 MobiDBLite consensus disorder prediction 77 109 - -
Car20g00592 232 MobiDBLite consensus disorder prediction 19 34 - -
Car20g00592 232 ProSiteProfiles PAS repeat profile. 114 187 IPR000014 -
Car20g00592 232 Pfam PAS domain 135 225 IPR000014 -
Car20g00592 232 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00592 Car-Chr20:3316494 Car02g00618 Car-Chr2:4649249 4.86E-29 dispersed
Car02g00191 Car-Chr2:1138326 Car20g00592 Car-Chr20:3316494 7.28E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00592 K20715 - csv:101215355 378.637