Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00618 ATGGAGAATGAATGTGGAGCGAAATTGATCAGAAATAATGGTTTGAGCCCACGTTCATCGGTTTCTAATGGCGGTCCAGATGGAACCGTCGATGTTCTTAAAGATTTGAAGGAAGCTAATGATTTAATCGAAGTTATTGTGGGTTTTTCTGGGTTTCGGAAAACGCAATCCAAGGAGTGTTTGAATTTGGTTAGGAGATTGAAGATGCTCGCGCCGTTGTTGGAGGAGATTCGTGACCTTTATGATATGGTTCCTGCTGAGGGTTTGAGTTCCCATATTGGTCAATTGAAAGAGGCGCTTCTTTTAGCCAAAAGGTTGCTGAAGAACTGCCACAATGGGAGCAAGATTTATCTGGCGTTTGATAATGAGGCTGTGATGGCGAGATTTCATGCTGTTTATGACAAATTGAAGGAAGCCCTTGATGGGATACCTTATGATGAACTTGGAGTCTCTGTTGAACTGAAAGAACAAGTTGAGCTGATGTCGACGCAGCTCAAACGAGCGAAGTGTAGGAAAGATACACAAGATATGGAGTTAGCAATGGATATGATGGTTGTGTTTTCGAAAAATGATGAGAGAAATGCTGATCCTGTTATACTTGGAAGATTAGCAAATAAATTGGAACTGCATAAGGTTGCAGATTTGGAAGCCGAAACCGAAGCTATACAAAAGTTGGTTCAACGTCGATGTGTGTCGAATCCTGAAAGTCTCCAGCAAATTATGGAACTTCTATGCAAGTTTAAGAAAATTGCAGGTATGGAGAATAGTGTTGCTTCTGGTGCTGCTCCTGTTGTGTTGAAACGTCTGCAACGGTGTCGGTCTACGTTAATCCCTCATGAATTCCTTTGTCCCATTTCGTTGGAAGTCATGACAGATCCTGTGATTGTGGCTACTGGGCAGACGTACGACCGTGATAGCATACAGACATGGTTGAATTCGAACCACCAGACATGCCCAAAAACAGGACAAACTTTGGTGCATTTGTCACTAGCTCCAAATTATGCCCTCAAGAACCTCATTTTGCAATGGTGTCAAAAGCACGACTATGAATTGCCGAAGAAGGAAGTAGGTTCCGGGTTCGGCGATACTCCGCCTGATCTCGCTCGGGAAATCTCCTCTTTAGTTCACAATCTATCGTCGAGTCAGTTGGATGTTCAGAAAGAGGCTATCATCAAGATCCGTGTCCTCTCCAAGGAGAACCCCGAGAATAGAGTTTGGATCGCGAATAGCGGAGTCATCCCTCCGTTGGTTAAGCTTCTATCCTACCCAGATCTCAATTTCCAAGAGCACACGGTGACCGCTCTATTGAACTTGTCGATCGACGACGCGAATAAAAGACTCATAGCAAGAGAAGGAGCCATTCCTGCTATCATAGAAATCTTGCAGCATGGAACAGAGGAGGCTAAGGAGAATTCTGCTGCTGCACTGTTTAGCTTGTCAATGCTAGATGAAAACAAGGTTCTGATTGGAACTCTAAAGGGAATCCCGCCATTAGTAGCGCTTCTTCGAGACGGTACGATCCGAGGGAAGAAGGATGCAGCTACTGCACTCTTTAACCTGTCGATGAATCAAGCAAACAAGTCCCGAGCGATCAAAGCCGGCATCATACAGCCCCTTCTCTTTTTACTTCAGGATAAGAACTTAGGAATGGTTGATGAAGCTTTATCGATCTTGTTACTCCTCGCATCACATCCGGAGGGACGGACCGAGATCGGACGCAACTCTTTCATCGAGATTCTAGTGAACATCATAATCGAAGGGACACCGAAGAACAAGGAATGTGCCACGTCGTTACTTCTCGAGCTGGGACGAAACAATTCGCCTTCCATTTTGGTTGCGCTGCAGTTTGGTGTATATGAACATTTGGTAGAGCTGACAAGATGTGGAACAAGTAGAGCACAGAGAAAAGCAAGCTCGCTTTTGCAGTATATGAGCAAATGTGAACACATTCCTTGA 1956 44.58 MENECGAKLIRNNGLSPRSSVSNGGPDGTVDVLKDLKEANDLIEVIVGFSGFRKTQSKECLNLVRRLKMLAPLLEEIRDLYDMVPAEGLSSHIGQLKEALLLAKRLLKNCHNGSKIYLAFDNEAVMARFHAVYDKLKEALDGIPYDELGVSVELKEQVELMSTQLKRAKCRKDTQDMELAMDMMVVFSKNDERNADPVILGRLANKLELHKVADLEAETEAIQKLVQRRCVSNPESLQQIMELLCKFKKIAGMENSVASGAAPVVLKRLQRCRSTLIPHEFLCPISLEVMTDPVIVATGQTYDRDSIQTWLNSNHQTCPKTGQTLVHLSLAPNYALKNLILQWCQKHDYELPKKEVGSGFGDTPPDLAREISSLVHNLSSSQLDVQKEAIIKIRVLSKENPENRVWIANSGVIPPLVKLLSYPDLNFQEHTVTALLNLSIDDANKRLIAREGAIPAIIEILQHGTEEAKENSAAALFSLSMLDENKVLIGTLKGIPPLVALLRDGTIRGKKDAATALFNLSMNQANKSRAIKAGIIQPLLFLLQDKNLGMVDEALSILLLLASHPEGRTEIGRNSFIEILVNIIIEGTPKNKECATSLLLELGRNNSPSILVALQFGVYEHLVELTRCGTSRAQRKASSLLQYMSKCEHIP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3457738 3460842 - Carg16138-RA Car20g00618 168477

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00618 651 Pfam U-box domain 277 347 IPR003613 GO:0004842|GO:0016567
Car20g00618 651 Pfam Armadillo/beta-catenin-like repeat 400 439 IPR000225 GO:0005515
Car20g00618 651 Pfam Armadillo/beta-catenin-like repeat 483 521 IPR000225 GO:0005515
Car20g00618 651 Pfam Armadillo/beta-catenin-like repeat 441 480 IPR000225 GO:0005515
Car20g00618 651 ProSiteProfiles U-box domain profile. 276 350 IPR003613 GO:0004842|GO:0016567
Car20g00618 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 493 535 IPR000225 GO:0005515
Car20g00618 651 Gene3D - 510 650 IPR011989 -
Car20g00618 651 Gene3D - 366 508 IPR011989 -
Car20g00618 651 SMART arm_5 400 440 IPR000225 GO:0005515
Car20g00618 651 SMART arm_5 523 563 IPR000225 GO:0005515
Car20g00618 651 SMART arm_5 564 604 IPR000225 GO:0005515
Car20g00618 651 SMART arm_5 482 522 IPR000225 GO:0005515
Car20g00618 651 SMART arm_5 441 481 IPR000225 GO:0005515
Car20g00618 651 SMART arm_5 606 646 IPR000225 GO:0005515
Car20g00618 651 PANTHER U BOX DOMAIN-CONTAINING 32 648 - -
Car20g00618 651 Coils Coil 151 171 - -
Car20g00618 651 SMART Ubox_2 280 343 IPR003613 GO:0004842|GO:0016567
Car20g00618 651 SUPERFAMILY RING/U-box 277 352 - -
Car20g00618 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 452 494 IPR000225 GO:0005515
Car20g00618 651 Gene3D - 29 144 IPR036537 GO:0007166
Car20g00618 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 411 453 IPR000225 GO:0005515
Car20g00618 651 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 351 IPR013083 -
Car20g00618 651 CDD RING-Ubox_PUB 281 323 IPR045210 -
Car20g00618 651 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 32 648 - -
Car20g00618 651 SUPERFAMILY ARM repeat 371 645 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00618 - - - cmax:111483940 1245.34
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00358 Car-Chr20:2013808 Car20g00618 Car-Chr20:3457738 3.84E-142 dispersed
Car20g00618 Car-Chr20:3457738 Car15g00153 Car-Chr15:845062 2.76E-96 dispersed
Car20g00618 Car-Chr20:3457738 Car01g00541 Car-Chr1:3209827 2.43E-165 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g278 . Blo15g00428 Bda06g00438 . . . . . . . . Cma20g00717 . Car20g00618 . . . . . . . . . . . . . . . . . Cone12ag1269 Cone8ag1323 . . Lsi10g00826 . . . . . . . . . . . . . Cmo20g00715 . . . . Cpe16g00348 . . . . . . . . . . . . . . . . . . Cme11g01284
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Car14g00515 . 1 1071 U-box Gene Family AT5G15400 74.4 0.0e+00 1568.9
Car11g00967 . 1 1040 U-box Gene Family AT5G15400 75.5 0.0e+00 1559.7
Car02g00348 CST 1 813 U-box Gene Family AT5G67340 50.6 4.4e-122 436.0
Car08g00264 . 36 792 U-box Gene Family AT3G54790 51.9 1.5e-131 467.6
Car02g00348 CST 197 813 U-box Gene Family AT2G23140 65.0 8.1e-115 411.8
Car20g00844 CST 233 866 U-box Gene Family AT2G23140 62.9 1.2e-110 397.9
Car05g00070 . 1 774 U-box Gene Family AT1G24330 59.2 4.7e-242 834.7
Car12g00061 . 1 809 U-box Gene Family AT1G24330 55.0 7.5e-232 800.8
Car04g01836 CCT 1 761 U-box Gene Family AT1G24330 56.7 1.6e-226 783.1
Car18g00655 CCT 1 739 U-box Gene Family AT1G24330 57.7 7.0e-222 767.7
Car05g00070 . 1 773 U-box Gene Family AT1G67530 59.6 7.1e-238 820.8
Car12g00061 . 1 713 U-box Gene Family AT1G67530 60.9 2.0e-232 802.7
Car04g01836 CCT 1 761 U-box Gene Family AT1G67530 56.3 3.2e-222 768.8
Car18g00655 CCT 1 739 U-box Gene Family AT1G67530 57.4 5.3e-217 751.5
Car07g00243 . 1 362 U-box Gene Family AT4G21350 63.1 8.9e-122 434.1
Car03g00452 . 1 362 U-box Gene Family AT4G21350 62.3 6.4e-120 427.9
Car02g01419 . 154 475 U-box Gene Family AT3G07360 56.0 1.8e-81 300.1
Car19g00142 . 134 458 U-box Gene Family AT3G07360 56.4 1.1e-80 297.4
Car04g00053 CST 263 458 U-box Gene Family AT1G71020 67.7 1.4e-71 267.7
Car04g00936 CST 245 446 U-box Gene Family AT1G71020 66.0 1.9e-71 267.3
Car15g00890 . 661 864 U-box Gene Family AT1G71020 54.4 7.8e-54 208.8
Car18g00828 CST 192 395 U-box Gene Family AT1G71020 53.6 9.0e-50 195.3
Car13g00102 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 3.8e-48 189.9
Car01g00541 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 6.4e-48 189.1
Car20g00358 CCT 256 426 U-box Gene Family AT1G71020 57.1 1.2e-46 184.9
Car04g01459 CST 247 414 U-box Gene Family AT1G71020 56.1 6.0e-46 182.6
Car04g00936 CST 6 650 U-box Gene Family AT1G23030 56.7 1.9e-108 390.6
Car04g00053 CST 16 662 U-box Gene Family AT1G23030 54.6 2.3e-103 373.6
Car01g00541 CCT,CST 93 638 U-box Gene Family AT2G28830 60.0 4.5e-104 375.9
Car20g00358 CCT 93 636 U-box Gene Family AT2G28830 50.2 4.8e-98 355.9
Car13g00102 CCT,CST 92 428 U-box Gene Family AT2G28830 56.1 8.0e-93 338.6
Car01g00541 CCT,CST 1 662 U-box Gene Family AT3G46510 68.8 3.1e-170 595.9
Car13g00102 CCT,CST 1 634 U-box Gene Family AT3G46510 68.7 3.5e-161 565.8
Car20g00358 CCT 11 639 U-box Gene Family AT3G46510 66.4 1.3e-160 563.9
Car04g01459 CST 16 616 U-box Gene Family AT3G46510 56.5 6.0e-113 405.6
Car18g00828 CST 20 602 U-box Gene Family AT3G46510 56.2 1.9e-103 374.0
Car04g01459 CST 12 619 U-box Gene Family AT3G54850 64.8 9.1e-151 531.2
Car18g00828 CST 12 604 U-box Gene Family AT3G54850 63.6 7.2e-140 495.0
Car20g00358 CCT 13 629 U-box Gene Family AT3G54850 56.4 2.6e-113 406.8
Car01g00541 CCT,CST 8 641 U-box Gene Family AT3G54850 54.8 5.4e-103 372.5
Car20g00618 . 97 650 U-box Gene Family AT5G42340 65.0 4.4e-124 442.6
Car18g00828 CST 74 601 U-box Gene Family AT5G42340 52.0 3.2e-58 223.8
Car07g01182 CST 9 672 U-box Gene Family AT5G01830 57.2 1.0e-200 697.2
Car03g00261 CST 9 669 U-box Gene Family AT5G01830 57.4 7.3e-199 691.0
Car18g00408 CST 1 707 U-box Gene Family AT1G29340 68.1 3.0e-246 848.6
Car13g00466 CST 1 710 U-box Gene Family AT1G29340 67.5 4.7e-244 841.3
Car01g00337 . 28 443 U-box Gene Family AT5G37490 50.1 1.7e-108 390.2
Car06g00464 . 2 407 U-box Gene Family AT3G52450 54.3 2.0e-125 446.4
Car03g00221 . 4 422 U-box Gene Family AT3G52450 52.9 3.1e-118 422.5
Car07g01144 . 3 393 U-box Gene Family AT3G52450 50.7 2.9e-108 389.4
Car06g00464 . 2 406 U-box Gene Family AT2G35930 56.0 3.3e-125 445.7
Car20g00128 . 10 409 U-box Gene Family AT2G35930 50.6 9.5e-117 417.5
Car03g00221 . 4 422 U-box Gene Family AT2G35930 51.3 2.1e-116 416.4
Car07g01144 . 3 393 U-box Gene Family AT2G35930 52.9 4.3e-109 392.1
Car04g00454 . 7 420 U-box Gene Family AT3G19380 65.1 2.8e-148 522.3
Car04g00454 . 1 420 U-box Gene Family AT1G49780 65.6 1.7e-153 539.7
Car07g00775 CST 1 411 U-box Gene Family AT5G64660 54.0 1.0e-121 434.1
Car03g00973 CST 1 411 U-box Gene Family AT5G64660 52.6 5.2e-118 421.8
Car07g00775 CST 1 411 U-box Gene Family AT5G09800 51.8 6.8e-107 384.8
Car01g01385 CCT,CST 47 499 U-box Gene Family AT3G49810 63.5 2.1e-157 552.7
Car09g00253 CCT,CST 79 519 U-box Gene Family AT3G49810 62.4 5.8e-152 534.6
Car05g00111 CCT,CST 23 452 U-box Gene Family AT3G49810 63.7 3.9e-148 521.9
Car12g00549 CCT,CST 1 415 U-box Gene Family AT3G49810 60.1 7.9e-133 471.1
Car01g01385 CCT,CST 47 499 U-box Gene Family AT5G65920 62.3 2.9e-151 532.3
Car05g00111 CCT,CST 19 452 U-box Gene Family AT5G65920 65.3 4.9e-151 531.6
Car09g00253 CCT,CST 79 519 U-box Gene Family AT5G65920 61.7 1.7e-148 523.1
Car12g00549 CCT,CST 1 415 U-box Gene Family AT5G65920 59.9 1.8e-129 459.9
Car06g00904 . 108 961 U-box Gene Family AT2G45910 52.2 1.9e-228 789.6
Car14g01849 CCT 1 875 U-box Gene Family AT2G45910 51.8 3.9e-226 781.9
Car05g01319 CST 1 281 U-box Gene Family AT2G19410 65.5 9.4e-113 405.2
Car05g00562 . 14 378 U-box Gene Family AT2G19410 51.5 1.4e-97 354.8
Car12g00262 . 326 557 U-box Gene Family AT2G19410 56.5 2.3e-71 267.7
Car15g01221 . 23 805 U-box Gene Family AT4G25160 53.9 6.9e-223 771.2
Car05g00562 . 69 380 U-box Gene Family AT4G25160 53.2 3.8e-88 323.6
Car12g00262 . 313 554 U-box Gene Family AT4G25160 54.9 3.0e-69 260.8
Car11g00114 . 1 500 U-box Gene Family AT5G65200 51.3 2.1e-95 347.1
Car15g00301 CST 58 552 U-box Gene Family AT5G40140 57.4 3.3e-96 349.7
Car04g02629 CST 56 545 U-box Gene Family AT5G40140 55.1 1.5e-85 314.3
Car13g00744 . 29 490 U-box Gene Family AT5G40140 53.7 1.0e-57 221.9
Car05g00854 . 4 814 U-box Gene Family AT1G76390 60.0 3.5e-264 908.3
Car05g00854 . 13 812 U-box Gene Family AT1G20780 61.6 7.9e-277 950.3
Car05g00070 . 1 775 U-box Gene Family AT1G27910 62.3 3.0e-265 911.8
Car04g01836 CCT 1 770 U-box Gene Family AT1G27910 61.7 3.0e-257 885.2
Car12g00061 . 1 817 U-box Gene Family AT1G27910 59.2 1.3e-255 879.8
Car18g00655 CCT 1 740 U-box Gene Family AT1G27910 62.6 4.4e-248 854.7
Car03g00830 . 1 588 U-box Gene Family AT5G67530 73.9 3.2e-254 874.8
Car07g00574 . 3 537 U-box Gene Family AT5G67530 72.7 5.2e-225 777.7
Car06g00961 . 15 177 U-box Gene Family AT5G67530 50.9 2.0e-43 174.5
Car14g00298 CST 12 162 U-box Gene Family AT5G67530 50.3 6.5e-42 169.5
Car07g00513 . 4 792 U-box Gene Family AT5G65500 50.9 2.2e-210 729.6
Car05g01319 CST 1 275 U-box Gene Family AT5G61550 52.5 8.6e-80 295.8
Car12g00262 . 317 554 U-box Gene Family AT5G61550 52.7 4.4e-68 256.9
Car05g01319 CST 1 276 U-box Gene Family AT5G51270 51.6 1.4e-79 295.0
Car06g01113 CST 1 516 U-box Gene Family AT1G04510 75.0 2.5e-223 771.9
Car14g01649 CST 1 513 U-box Gene Family AT1G04510 74.8 7.4e-223 770.4
Car06g01113 CST 1 485 U-box Gene Family AT2G33340 73.7 9.6e-209 723.4
Car14g01649 CST 1 485 U-box Gene Family AT2G33340 72.9 1.5e-206 716.1
Car19g00141 . 10 278 U-box Gene Family AT3G07370 65.1 3.6e-99 358.6
Car02g01420 . 11 287 U-box Gene Family AT3G07370 64.3 1.4e-98 356.7
Car14g00515 . 1 1071 U-box Gene Family AT5G15400 74.4 0.0e+00 1568.9
Car11g00967 . 1 1040 U-box Gene Family AT5G15400 75.5 0.0e+00 1559.7
Car02g00348 CST 1 813 U-box Gene Family AT5G67340 50.6 4.4e-122 436.0
Car08g00264 . 36 792 U-box Gene Family AT3G54790 51.9 1.5e-131 467.6
Car02g00348 CST 197 813 U-box Gene Family AT2G23140 65.0 8.1e-115 411.8
Car20g00844 CST 233 866 U-box Gene Family AT2G23140 62.9 1.2e-110 397.9
Car05g00070 . 1 774 U-box Gene Family AT1G24330 59.2 4.7e-242 834.7
Car12g00061 . 1 809 U-box Gene Family AT1G24330 55.0 7.5e-232 800.8
Car04g01836 CCT 1 761 U-box Gene Family AT1G24330 56.7 1.6e-226 783.1
Car18g00655 CCT 1 739 U-box Gene Family AT1G24330 57.7 7.0e-222 767.7
Car05g00070 . 1 773 U-box Gene Family AT1G67530 59.6 7.1e-238 820.8
Car12g00061 . 1 713 U-box Gene Family AT1G67530 60.9 2.0e-232 802.7
Car04g01836 CCT 1 761 U-box Gene Family AT1G67530 56.3 3.2e-222 768.8
Car18g00655 CCT 1 739 U-box Gene Family AT1G67530 57.4 5.3e-217 751.5
Car07g00243 . 1 362 U-box Gene Family AT4G21350 63.1 8.9e-122 434.1
Car03g00452 . 1 362 U-box Gene Family AT4G21350 62.3 6.4e-120 427.9
Car02g01419 . 154 475 U-box Gene Family AT3G07360 56.0 1.8e-81 300.1
Car19g00142 . 134 458 U-box Gene Family AT3G07360 56.4 1.1e-80 297.4
Car04g00053 CST 263 458 U-box Gene Family AT1G71020 67.7 1.4e-71 267.7
Car04g00936 CST 245 446 U-box Gene Family AT1G71020 66.0 1.9e-71 267.3
Car15g00890 . 661 864 U-box Gene Family AT1G71020 54.4 7.8e-54 208.8
Car18g00828 CST 192 395 U-box Gene Family AT1G71020 53.6 9.0e-50 195.3
Car13g00102 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 3.8e-48 189.9
Car01g00541 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 6.4e-48 189.1
Car20g00358 CCT 256 426 U-box Gene Family AT1G71020 57.1 1.2e-46 184.9
Car04g01459 CST 247 414 U-box Gene Family AT1G71020 56.1 6.0e-46 182.6
Car04g00936 CST 6 650 U-box Gene Family AT1G23030 56.7 1.9e-108 390.6
Car04g00053 CST 16 662 U-box Gene Family AT1G23030 54.6 2.3e-103 373.6
Car01g00541 CCT,CST 93 638 U-box Gene Family AT2G28830 60.0 4.5e-104 375.9
Car20g00358 CCT 93 636 U-box Gene Family AT2G28830 50.2 4.8e-98 355.9
Car13g00102 CCT,CST 92 428 U-box Gene Family AT2G28830 56.1 8.0e-93 338.6
Car01g00541 CCT,CST 1 662 U-box Gene Family AT3G46510 68.8 3.1e-170 595.9
Car13g00102 CCT,CST 1 634 U-box Gene Family AT3G46510 68.7 3.5e-161 565.8
Car20g00358 CCT 11 639 U-box Gene Family AT3G46510 66.4 1.3e-160 563.9
Car04g01459 CST 16 616 U-box Gene Family AT3G46510 56.5 6.0e-113 405.6
Car18g00828 CST 20 602 U-box Gene Family AT3G46510 56.2 1.9e-103 374.0
Car04g01459 CST 12 619 U-box Gene Family AT3G54850 64.8 9.1e-151 531.2
Car18g00828 CST 12 604 U-box Gene Family AT3G54850 63.6 7.2e-140 495.0
Car20g00358 CCT 13 629 U-box Gene Family AT3G54850 56.4 2.6e-113 406.8
Car01g00541 CCT,CST 8 641 U-box Gene Family AT3G54850 54.8 5.4e-103 372.5
Car20g00618 . 97 650 U-box Gene Family AT5G42340 65.0 4.4e-124 442.6
Car18g00828 CST 74 601 U-box Gene Family AT5G42340 52.0 3.2e-58 223.8
Car07g01182 CST 9 672 U-box Gene Family AT5G01830 57.2 1.0e-200 697.2
Car03g00261 CST 9 669 U-box Gene Family AT5G01830 57.4 7.3e-199 691.0
Car18g00408 CST 1 707 U-box Gene Family AT1G29340 68.1 3.0e-246 848.6
Car13g00466 CST 1 710 U-box Gene Family AT1G29340 67.5 4.7e-244 841.3
Car01g00337 . 28 443 U-box Gene Family AT5G37490 50.1 1.7e-108 390.2
Car06g00464 . 2 407 U-box Gene Family AT3G52450 54.3 2.0e-125 446.4
Car03g00221 . 4 422 U-box Gene Family AT3G52450 52.9 3.1e-118 422.5
Car07g01144 . 3 393 U-box Gene Family AT3G52450 50.7 2.9e-108 389.4
Car06g00464 . 2 406 U-box Gene Family AT2G35930 56.0 3.3e-125 445.7
Car20g00128 . 10 409 U-box Gene Family AT2G35930 50.6 9.5e-117 417.5
Car03g00221 . 4 422 U-box Gene Family AT2G35930 51.3 2.1e-116 416.4
Car07g01144 . 3 393 U-box Gene Family AT2G35930 52.9 4.3e-109 392.1
Car04g00454 . 7 420 U-box Gene Family AT3G19380 65.1 2.8e-148 522.3
Car04g00454 . 1 420 U-box Gene Family AT1G49780 65.6 1.7e-153 539.7
Car07g00775 CST 1 411 U-box Gene Family AT5G64660 54.0 1.0e-121 434.1
Car03g00973 CST 1 411 U-box Gene Family AT5G64660 52.6 5.2e-118 421.8
Car07g00775 CST 1 411 U-box Gene Family AT5G09800 51.8 6.8e-107 384.8
Car01g01385 CCT,CST 47 499 U-box Gene Family AT3G49810 63.5 2.1e-157 552.7
Car09g00253 CCT,CST 79 519 U-box Gene Family AT3G49810 62.4 5.8e-152 534.6
Car05g00111 CCT,CST 23 452 U-box Gene Family AT3G49810 63.7 3.9e-148 521.9
Car12g00549 CCT,CST 1 415 U-box Gene Family AT3G49810 60.1 7.9e-133 471.1
Car01g01385 CCT,CST 47 499 U-box Gene Family AT5G65920 62.3 2.9e-151 532.3
Car05g00111 CCT,CST 19 452 U-box Gene Family AT5G65920 65.3 4.9e-151 531.6
Car09g00253 CCT,CST 79 519 U-box Gene Family AT5G65920 61.7 1.7e-148 523.1
Car12g00549 CCT,CST 1 415 U-box Gene Family AT5G65920 59.9 1.8e-129 459.9
Car06g00904 . 108 961 U-box Gene Family AT2G45910 52.2 1.9e-228 789.6
Car14g01849 CCT 1 875 U-box Gene Family AT2G45910 51.8 3.9e-226 781.9
Car05g01319 CST 1 281 U-box Gene Family AT2G19410 65.5 9.4e-113 405.2
Car05g00562 . 14 378 U-box Gene Family AT2G19410 51.5 1.4e-97 354.8
Car12g00262 . 326 557 U-box Gene Family AT2G19410 56.5 2.3e-71 267.7
Car15g01221 . 23 805 U-box Gene Family AT4G25160 53.9 6.9e-223 771.2
Car05g00562 . 69 380 U-box Gene Family AT4G25160 53.2 3.8e-88 323.6
Car12g00262 . 313 554 U-box Gene Family AT4G25160 54.9 3.0e-69 260.8
Car11g00114 . 1 500 U-box Gene Family AT5G65200 51.3 2.1e-95 347.1
Car15g00301 CST 58 552 U-box Gene Family AT5G40140 57.4 3.3e-96 349.7
Car04g02629 CST 56 545 U-box Gene Family AT5G40140 55.1 1.5e-85 314.3
Car13g00744 . 29 490 U-box Gene Family AT5G40140 53.7 1.0e-57 221.9
Car05g00854 . 4 814 U-box Gene Family AT1G76390 60.0 3.5e-264 908.3
Car05g00854 . 13 812 U-box Gene Family AT1G20780 61.6 7.9e-277 950.3
Car05g00070 . 1 775 U-box Gene Family AT1G27910 62.3 3.0e-265 911.8
Car04g01836 CCT 1 770 U-box Gene Family AT1G27910 61.7 3.0e-257 885.2
Car12g00061 . 1 817 U-box Gene Family AT1G27910 59.2 1.3e-255 879.8
Car18g00655 CCT 1 740 U-box Gene Family AT1G27910 62.6 4.4e-248 854.7
Car03g00830 . 1 588 U-box Gene Family AT5G67530 73.9 3.2e-254 874.8
Car07g00574 . 3 537 U-box Gene Family AT5G67530 72.7 5.2e-225 777.7
Car06g00961 . 15 177 U-box Gene Family AT5G67530 50.9 2.0e-43 174.5
Car14g00298 CST 12 162 U-box Gene Family AT5G67530 50.3 6.5e-42 169.5
Car07g00513 . 4 792 U-box Gene Family AT5G65500 50.9 2.2e-210 729.6
Car05g01319 CST 1 275 U-box Gene Family AT5G61550 52.5 8.6e-80 295.8
Car12g00262 . 317 554 U-box Gene Family AT5G61550 52.7 4.4e-68 256.9
Car05g01319 CST 1 276 U-box Gene Family AT5G51270 51.6 1.4e-79 295.0
Car06g01113 CST 1 516 U-box Gene Family AT1G04510 75.0 2.5e-223 771.9
Car14g01649 CST 1 513 U-box Gene Family AT1G04510 74.8 7.4e-223 770.4
Car06g01113 CST 1 485 U-box Gene Family AT2G33340 73.7 9.6e-209 723.4
Car14g01649 CST 1 485 U-box Gene Family AT2G33340 72.9 1.5e-206 716.1
Car19g00141 . 10 278 U-box Gene Family AT3G07370 65.1 3.6e-99 358.6
Car02g01420 . 11 287 U-box Gene Family AT3G07370 64.3 1.4e-98 356.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007785 2 1 2 0 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 2 1 2 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Car20g00618 Car_Chr20 FPKM 2.602564 2.322216 0.236403 0.821941 3.627947 4.378016 3.280623 1.0262 1.380295 0.800314