Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car20g00651 | ATGGATACCTTCTTGGATGAAATTCTAAAGGACACTCATGCTTGCACACACGCTCATACTTGCAATCCTTCTGGTCCTGATTATTCACATACACACACCTGTTTTCATGTCCATACTAAAGTTGTCTCTTCCCCGACCGAAGACAAGGTTTCCACTGACGACACAGCGGAGTCTGTGGATAAGAAGACTAAGAAACGCTCGCTAGGTAACCGCGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGGGCTGCATCATTGGAAGATGAAGTTATGAGATTGAAGGCCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGCCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTTAAATGTTTGCTTGTGGATATTCGAGGAAGAATTGAAGGGGAGATTGGAAGCTTTCCATATCATAAACCAGCCAATTCAAATCTTCTCAATCAAAATGCACCTGGAAGTTATGTGATAAATCCATGTAATGTTCAATGCAACGATCAGCCGTATTGCCTTAATGCAGGGTCCGATGGAAAAAGTGGAGAGAGCGTTTTGTTGAACGGGCATAGTTTTAGCGCGTGTGACATCGGAAATCTCGAGTGCTTGGCCAATCAAAACACAGGAGCAAAGGAACTTCCGGACTGTGAATTAAACCAGAAGAAAGGTAAAACCAGAGCACTTAGCTTTTAA | 690 | 43.77 | MDTFLDEILKDTHACTHAHTCNPSGPDYSHTHTCFHVHTKVVSSPTEDKVSTDDTAESVDKKTKKRSLGNREAVRKYREKKKARAASLEDEVMRLKALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGSFPYHKPANSNLLNQNAPGSYVINPCNVQCNDQPYCLNAGSDGKSGESVLLNGHSFSACDIGNLECLANQNTGAKELPDCELNQKKGKTRALSF | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 3670644 | 3671333 | - | Carg16171-RA | Car20g00651 | 168510 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car20g00651 | 229 | MobiDBLite | consensus disorder prediction | 50 | 71 | - | - | |
Car20g00651 | 229 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 60 | 107 | IPR004827 | GO:0003700|GO:0006355 | |
Car20g00651 | 229 | Pfam | Basic region leucine zipper | 60 | 115 | IPR004827 | GO:0003700|GO:0006355 | |
Car20g00651 | 229 | MobiDBLite | consensus disorder prediction | 45 | 71 | - | - | |
Car20g00651 | 229 | Coils | Coil | 71 | 105 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car20g00651 | Car-Chr20:3670644 | Car16g00666 | Car-Chr16:4226184 | 3.94E-06 | dispersed | |
Car16g00620 | Car-Chr16:3968604 | Car20g00651 | Car-Chr20:3670644 | 1.23E-114 | wgd | |
Car19g00567 | Car-Chr19:7158581 | Car20g00651 | Car-Chr20:3670644 | 5.69E-117 | wgd | |
Car20g00651 | Car-Chr20:3670644 | Car07g00657 | Car-Chr7:3338708 | 2.89E-141 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5384 | PF07716 | bZIP_2 | 1.90E-14 | CL0018 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car20g00651 | K25785 | - | cmax:111483945 | 443.736 |