Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00651 ATGGATACCTTCTTGGATGAAATTCTAAAGGACACTCATGCTTGCACACACGCTCATACTTGCAATCCTTCTGGTCCTGATTATTCACATACACACACCTGTTTTCATGTCCATACTAAAGTTGTCTCTTCCCCGACCGAAGACAAGGTTTCCACTGACGACACAGCGGAGTCTGTGGATAAGAAGACTAAGAAACGCTCGCTAGGTAACCGCGAAGCAGTTCGTAAATACCGGGAGAAGAAAAAGGCAAGGGCTGCATCATTGGAAGATGAAGTTATGAGATTGAAGGCCCTGAATCAGCAACTGTTGAAGAGATTGCAAGGCCAGGCTGCATTGGAGGCTGAGATTTCTAGGCTTAAATGTTTGCTTGTGGATATTCGAGGAAGAATTGAAGGGGAGATTGGAAGCTTTCCATATCATAAACCAGCCAATTCAAATCTTCTCAATCAAAATGCACCTGGAAGTTATGTGATAAATCCATGTAATGTTCAATGCAACGATCAGCCGTATTGCCTTAATGCAGGGTCCGATGGAAAAAGTGGAGAGAGCGTTTTGTTGAACGGGCATAGTTTTAGCGCGTGTGACATCGGAAATCTCGAGTGCTTGGCCAATCAAAACACAGGAGCAAAGGAACTTCCGGACTGTGAATTAAACCAGAAGAAAGGTAAAACCAGAGCACTTAGCTTTTAA 690 43.77 MDTFLDEILKDTHACTHAHTCNPSGPDYSHTHTCFHVHTKVVSSPTEDKVSTDDTAESVDKKTKKRSLGNREAVRKYREKKKARAASLEDEVMRLKALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGSFPYHKPANSNLLNQNAPGSYVINPCNVQCNDQPYCLNAGSDGKSGESVLLNGHSFSACDIGNLECLANQNTGAKELPDCELNQKKGKTRALSF 229
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 3670644 3671333 - Carg16171-RA Car20g00651 168510
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car20g00651 229 MobiDBLite consensus disorder prediction 50 71 - -
Car20g00651 229 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 60 107 IPR004827 GO:0003700|GO:0006355
Car20g00651 229 Pfam Basic region leucine zipper 60 115 IPR004827 GO:0003700|GO:0006355
Car20g00651 229 MobiDBLite consensus disorder prediction 45 71 - -
Car20g00651 229 Coils Coil 71 105 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00651 Car-Chr20:3670644 Car16g00666 Car-Chr16:4226184 3.94E-06 dispersed
Car16g00620 Car-Chr16:3968604 Car20g00651 Car-Chr20:3670644 1.23E-114 wgd
Car19g00567 Car-Chr19:7158581 Car20g00651 Car-Chr20:3670644 5.69E-117 wgd
Car20g00651 Car-Chr20:3670644 Car07g00657 Car-Chr7:3338708 2.89E-141 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5384 PF07716 bZIP_2 1.90E-14 CL0018 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00651 K25785 - cmax:111483945 443.736