Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00654 ATGGCCAACGAAGAAGACGATCTTGATCTTCTCCTTTCTCTCCAAGATAAAGTCGTTGAAACTCCTCCTGGAACTCCGCCTCATGCCTCAGATTTACTCTCCGACGATGAATCACCAAGACGAGCGGGTCATGCGGATATGTCTATCTTCAGAAACGCTGTCAAAGACTGCCTTGACTATAGTCACATACCAACTGAGAAAAGTGGAAAAACAAACCGGTCTAAGGCCTCTACCGATGTTACAATCGAGAAGTTTTCTGGTTTGCGAGTGAGGAATCAACTGGTAGGACCTGTAGAGCTCCACGATCGTTTTTCTGACATTCGCTTCGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGAGACACCCTTTCAGGCTGTTGGGTAACTGTAGGAGTGTTGACTGAGAAAGGGAGCCCAAAGACAAGCTCTACAGGGAAAGCTTACTGCATCTGGAAACTTAGTTGTTTGGATGAAAACGCTGTTTCTGTTTTCTTATTTGGTGATGCATATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCAGTGTTCAACTCTACAGTACGCAAGGATGCAATGGGCATGGGGTTTTCTTTAAGTGTGTATCAATCAAGCCAGTTGTTAAAAATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAAAAGAAGGATGGGATGGCCTGTACAACAGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAAATCAAAGGCATCAGAAAAATATTCCACCACCATACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATCATCATCTCAAGGCAGAAGGAGTTTACATGGTAAATCCACTAGTCGGTAAAGTGAATTCTAAACATCGAGCGCCGCCAGCAAAACTGTTGTCTGTGGAAGGCCTGAAAAAGGCATTGAGCAATGCAGATAATGTGACCACCAATGTACACTCACAAGGGAAAAGATTCCTTGCCGAGATCACAGGGAAAATGACTGATAAAAGTGGAAATAAAGAATTTTCCAGACAAAGTCAGCAGAGGATCAGTTCAGAGAAGACATCAATTTCGAAGTCATCTGGAGTTGAAAATCAACAACAAGATCCAAAAAGAACGAAAACGAGCCATGCTCCGGCAGACAAAACCACAAAAGACATGGGAAAGATGGTGGAGTTGGACTATATTAGTTCAGATGATGATATCGACCTTACATTCACCCTATAA 1239 42.86 MANEEDDLDLLLSLQDKVVETPPGTPPHASDLLSDDESPRRAGHADMSIFRNAVKDCLDYSHIPTEKSGKTNRSKASTDVTIEKFSGLRVRNQLVGPVELHDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENAVSVFLFGDAYKRNCKELAGTVFAVFNSTVRKDAMGMGFSLSVYQSSQLLKMGTSDDYGVCKGKKKDGMACTTVINRRRGIYCKYHKSKASEKYSTTIRTELKGGNLRTAFRDHHLKAEGVYMVNPLVGKVNSKHRAPPAKLLSVEGLKKALSNADNVTTNVHSQGKRFLAEITGKMTDKSGNKEFSRQSQQRISSEKTSISKSSGVENQQQDPKRTKTSHAPADKTTKDMGKMVELDYISSDDDIDLTFTL 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3680658 3685127 - Carg16174-RA Car20g00654 168513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00654 412 MobiDBLite consensus disorder prediction 344 373 - -
Car20g00654 412 Pfam Primase zinc finger 213 255 IPR015408 GO:0005634|GO:0006260
Car20g00654 412 MobiDBLite consensus disorder prediction 17 42 - -
Car20g00654 412 MobiDBLite consensus disorder prediction 335 393 - -
Car20g00654 412 Gene3D - 73 247 IPR012340 -
Car20g00654 412 MobiDBLite consensus disorder prediction 374 393 - -
Car20g00654 412 PANTHER PROTEIN MCM10 HOMOLOG 42 382 IPR040184 GO:0003690|GO:0003697|GO:0006270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00654 K10736 - csv:101219022 672.544