Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00663 ATGGGGTCTTTGAAGCTGCCTCCGTCGACGACGGTGCTGAAATGGCTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGCAACAATTACACCTTTTCCAACTACTCCGACGTCCTTAAGTCTCTGATGAATCTCACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGTAAAGCCTTTGGCTTACTCGCCGGAATCGCCTGTGATCGTTTCCCCACGTGGGTCATCTTGCTCATTGGATCTCTGGAAGGCCTTCTTGGCTATGGCGCTCAGTGGCTCGTCGTTAGCCAGAGGATTTCTCCTCTTCCTTATTGGCAGATGTGTATCTTCTTGTGTATGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTGGTGACCTGTATCAGAAACTTCCGGAAGAATCGCGGCCCTGTTTCCGGCATACTTAAAGGCTACGTTGGTCTCAGCACCGCTATTTTCACCGATCTCTGTACTGCTCTGTTTTCTGACGACCCTTCTTCCTTCCTCGTCATGCTCTCCGTTGTCCCCTTCGCTGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCGACAACCGCCGCCAAAGCCGCCGCTGACACCCAGGAGGAATCCAACTTCTTCGCCGTCTTCAACGCTCTAGCCGTCATCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTTCGGCACCGTCGTCTCCCAATTGTTCTCCGCCGGGTTACTAATTCTCCTCGGATCCCCTTTGATCATTCCGATTTACTCGTTTTTCAAGAACTGCCACTCGAATTCAGCCCAATCGGACTTGGAGACTCAAACAGAGGAGCCGCTGTTGAAGGAAGAAGCTACCGTTGCAGCTCCGGTAAAGGAGGAAATTACAGAGGAGGAGCAGAGACAGCCAGTGATCGGAGAAGAACACACGATTATTCAGGCGGTGAAAACCATTGATTTCTGGGTATTGTTCATATCGTTCCTATGTGGAGTTGGGACCGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTAGCTCTGGGCTACGCCGACGTCTCCATGTTCGTCTCTCTCATAAGCATTTGGGGCTTTTTCGGCCGGATCCTCTCCGGTTCCCTCTCCGAGCATTTCCTCAAGAAATTGGGCACACCAAGGCCCTTATGGAATGCAGCATCTCAAATTCTAATGACAATTGGCTACATCTTGATGGCGATGGCAATGCCAGGGTCTCTCTACATCGGCTCAGTCATAGTCGGGCTCTGTTACGGTGTTCGTCTCTCAATCACCGTCCCAACAGCCTCAGAGCTCTTCGGCCTCAAATACTATGGTCTCATCTACAACATTTTGATCCTTAACCTCCCAATCGGGTCGTTTCTCTTCTCTGGGCTTCTCGCGGGATTCCTCTACGACATGGAGGCGACCCCGACGGAGGGCGGGGGGAACACGTGCATCGGCGGCCATTGCTATAGAATTGTGTTTGTTGTGATGGCGTTGGCTTGTGGGATTGGGTTGGTTTTGGACATTTGGTTGGCATATAGGACCAAGGGGCTTTATTCTAAGCTGAAAGGGAACAAGAGATCAAAGAAGGGAAGCAGCAATAATAGCTCGTTGAGTTGA 1644 51.34 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDVLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLSVVPFAVCLFAMFFLREIPPPTTAAKAAADTQEESNFFAVFNALAVIVAVYLLCFDFIKNFGTVVSQLFSAGLLILLGSPLIIPIYSFFKNCHSNSAQSDLETQTEEPLLKEEATVAAPVKEEITEEEQRQPVIGEEHTIIQAVKTIDFWVLFISFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLISIWGFFGRILSGSLSEHFLKKLGTPRPLWNAASQILMTIGYILMAMAMPGSLYIGSVIVGLCYGVRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACGIGLVLDIWLAYRTKGLYSKLKGNKRSKKGSSNNSSLS 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3738659 3740468 + Carg16183-RA Car20g00663 168522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00663 547 Gene3D MFS general substrate transporter like domains 324 545 IPR036259 -
Car20g00663 547 Pfam Nodulin-like 14 264 IPR010658 -
Car20g00663 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 540 - -
Car20g00663 547 CDD MFS_Mch1p_like 13 513 - -
Car20g00663 547 SUPERFAMILY MFS general substrate transporter 14 525 IPR036259 -
Car20g00663 547 Gene3D MFS general substrate transporter like domains 10 209 IPR036259 -
Car20g00663 547 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00160 Car-Chr10:762077 Car20g00663 Car-Chr20:3738659 3.27E-90 dispersed
Car11g00131 Car-Chr11:731118 Car20g00663 Car-Chr20:3738659 1.21E-86 dispersed
Car15g00079 Car-Chr15:480618 Car20g00663 Car-Chr20:3738659 5.00E-117 dispersed
Car16g00615 Car-Chr16:3939831 Car20g00663 Car-Chr20:3738659 0 wgd
Car20g00663 Car-Chr20:3738659 Car07g00642 Car-Chr7:3258017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00663 - - cmos:111448555 992.26