Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00665 ATGCGAAGTGCTGTGTATTTCTCTCGCAACAAGGAAGGTAAAGTTCTTCCAATCCCATCAAAACCCCAATCTTATCGCTTTTCCTTCAATCTTCCAATGGATCGCTCACTCCTCCTCGCCACTCTTTTCACTCTTCTTCTTCTTCTCCCAGATGTTCAATCGACGTCTTTTAAGCTAATCAACAAGTGTCGGACCACGATTTGGCCGGGTCTGTTATCAGGCGCCAACACCCCCCAGCTTCCGACCACCGGCTTCGCCCTCCGCAGCGGCAAATCCAAGATCGTTCCGGTCCCGAAATCTTGGTCGGGTCGGTTATGGGGTCGGACCCTTTGTGGGTTAGATTCAGATGGGAAGTTCTCTTGTCTCACCGGCGATTGTGGGTCGGGTAAAGTGGAGTGTGACGGCGGCGGTGCTAAACCACCGGCTACCTTGGCGGAGTTCACTCTCAACGGCGCCGATGGGCTTGATTTTTACGACGTCAGCTTGGTCGACGGTTATAATCTTCCGATGCTGGTTGTGGCCAAAGGTGGAACCAGAGGCGGTTGCGCTGCTACCGGCTGTTTGGTGGATTTGAACGGCGCGTGTCCATCGGAGCTACGAGTAGCGCGTGGTGGTAGTCGCGGTGGAAGTAGCGTGGCTTGTAGAAGCGCGTATCACTTCGACACGAACTTTAGATCCGTTTTGGAATTAGATCTCGGTTCTATTAAGAGTTCATTGTCGGTTCGTAATGCTAGTAGTCTCTCAGAAAGTGTTGAGTGCAAGGAAAGACGGGGCAGCGTTACCGCTCGTGAACAAGACCATGATGTACTTGAGAAGCCGAAGATCGATCAGCATTCGATCGGCAGAGCCGCCACATTCACCTTCGTTAACCGGTGCGATTTCACCGTTTGGCCCGGCATTCTCGCCAATGCCGGCAACCCTACTCTCGGCACCACCGGTTTCGAACTCCCCAAGGACACTTCCCGCTCCTTTCTCGCTCCTACTGGTTGGTCCGGTCGTTTCTGGGGCCGAACTACCTGTAACTTCGACGGATCCGGTTCTGGATCCTGCGTAACCGGCGACTGCGGTTCTGGTCAAGTCGAGTGCAATGGCGCTGGAGCTGCCCCGCCGGCTACTCTCGCTGAGTTCACTCTCGGTACTGGCGGGCAGGACTTTTACGATGTTAGTCTCGTTGATGGATATAATCTCCCCATGATCGTTGAAGGAACCGGCGGGTCTGGTCAGTGTGCTTCGACGGGATGCTCCACGGATCTGAACCGTCAATGTCCGCCGGAGCTGAGAGTTGGGGAAGGAGACGCGTGTAAGAGCGCGTGTGAGGCGTTTGGGACTGCGGAGTATTGTTGTAGCGGCGCGTACGGTTCACCCAACTCTTGTAAGCCGTCGGTGTACTCGGAAATGTTCAAATCTGCTTGTCCGAGGTCGTATAGCTACGCCTACGACGATGCTACGAGCACATTCACTTGTACCGGCGCCGATTACACCATTACATTTTGCCCTTCATCTCCAAGCCAAAAATCATCGAGTATTCCTACTCCAACAACACCTGATGCATCTCAAGAGTATGGATCTGAATCTGGGTTTGAGTCGGGGTCGGGGTCGGAGTATGGGATGGGGTATTCGGGAGCCTCTGGAACGGATATGTTAGGGAGAGGTGCTAGTTCAGGATCAGAGTTGGGGTCGGGGTCAGGGTCGGGGTCGGCGTCAGGATCTGGGGAAGCTATGCTAGCAGATGGGTCATGGTTGGCTGGTCTGGCTATGGGAGACGCAGCTAAAACTGTGTCTCCTCCATCCATTATACTGTTTGTTGTAACGTTTATTGTTATCTTGTCTTCTGTATTCTTGTAG 1845 53.5 MRSAVYFSRNKEGKVLPIPSKPQSYRFSFNLPMDRSLLLATLFTLLLLLPDVQSTSFKLINKCRTTIWPGLLSGANTPQLPTTGFALRSGKSKIVPVPKSWSGRLWGRTLCGLDSDGKFSCLTGDCGSGKVECDGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLVVAKGGTRGGCAATGCLVDLNGACPSELRVARGGSRGGSSVACRSAYHFDTNFRSVLELDLGSIKSSLSVRNASSLSESVECKERRGSVTAREQDHDVLEKPKIDQHSIGRAATFTFVNRCDFTVWPGILANAGNPTLGTTGFELPKDTSRSFLAPTGWSGRFWGRTTCNFDGSGSGSCVTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGQCASTGCSTDLNRQCPPELRVGEGDACKSACEAFGTAEYCCSGAYGSPNSCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSSPSQKSSSIPTPTTPDASQEYGSESGFESGSGSEYGMGYSGASGTDMLGRGASSGSELGSGSGSGSASGSGEAMLADGSWLAGLAMGDAAKTVSPPSIILFVVTFIVILSSVFL 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3747654 3753908 - Carg16185-RA Car20g00665 168524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00665 614 MobiDBLite consensus disorder prediction 550 569 - -
Car20g00665 614 MobiDBLite consensus disorder prediction 500 532 - -
Car20g00665 614 MobiDBLite consensus disorder prediction 550 570 - -
Car20g00665 614 ProSiteProfiles Thaumatin family profile. 283 499 IPR001938 -
Car20g00665 614 ProSiteProfiles Thaumatin family profile. 54 217 IPR001938 -
Car20g00665 614 MobiDBLite consensus disorder prediction 500 530 - -
Car20g00665 614 Pfam Thaumatin family 290 499 IPR001938 -
Car20g00665 614 Pfam Thaumatin family 61 218 IPR001938 -
Car20g00665 614 ProSitePatterns Thaumatin family signature. 117 133 IPR017949 -
Car20g00665 614 ProSitePatterns Thaumatin family signature. 346 362 IPR017949 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00355 Car-Chr6:1934079 Car20g00665 Car-Chr20:3747654 1.74E-21 dispersed
Car06g00510 Car-Chr6:2862907 Car20g00665 Car-Chr20:3747654 7.61E-53 dispersed
Car09g00086 Car-Chr9:437417 Car20g00665 Car-Chr20:3747654 4.57E-65 dispersed
Car12g00381 Car-Chr12:2434079 Car20g00665 Car-Chr20:3747654 1.45E-43 dispersed
Car13g00828 Car-Chr13:8984635 Car20g00665 Car-Chr20:3747654 6.35E-36 dispersed
Car16g01168 Car-Chr16:9936919 Car20g00665 Car-Chr20:3747654 6.14E-58 dispersed
Car18g00061 Car-Chr18:309546 Car20g00665 Car-Chr20:3747654 2.24E-36 dispersed
Car20g00665 Car-Chr20:3747654 Car05g00183 Car-Chr5:965515 6.15E-41 dispersed
Car01g01550 Car-Chr1:12961740 Car20g00665 Car-Chr20:3747654 1.83E-65 wgd
Car20g00665 Car-Chr20:3747654 Car03g00627 Car-Chr3:5720392 6.61E-57 wgd
Car20g00665 Car-Chr20:3747654 Car05g00259 Car-Chr5:1442406 1.66E-69 wgd
Car20g00665 Car-Chr20:3747654 Car07g00370 Car-Chr7:1850908 5.72E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00665 - - cmos:111448558 599.356