Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00740 ATGAATTACAACAGGAACAACCAAAACGAACACGTCGTGAACATAACGCCAGTCGGCGGCGGAGGACAAGGAGGAGAATGGCCGCAGCCGCCGCCTCCGCCGCCGACTCCTCCGCCGTTGGGAATAGTTAGCAGTGATATGAGTTCGAATAACTCGGGGCCACACGGGCCGGTGTTGCCGCCGCCTCACCCGTCGGTGGCGCTAGGGTTCAATAAGTGCACGTTCACATTCGACGAGCTAATGGCGGCGACGGGGGGATTCTCTCCGGCGAACCTGTTAGGGCAAGGGGGATTCGGGTACGTTCACAAAGGAGTTTTGCCTAACGGCAAGGAAATTGCAGTGAAGAGCCTGAAATCGGGAAGTGGTCAAGGAGGTCGGGAATTCGCGGCGGAAGTGGAGATAATTAGCCGCGTTCACCACCGCCATTTGGTGTCGTTAATCGGACATTGCCTCGCCGGTGAACGGAAGTTGTTGGTTTACGAATTTGTCCCTAATAACAACCTCCAATTCCACCTTCGCGGCAAGGGGCAGTCACCGTTGGACTGGCCAACCAGGGTGAAGATAGCATTAGGCTCAGCCAAGGGCCTCGCCTATCTACACGAAGACTGTCATCCTCGCATCATCCACCGAGATATCAAGACTGCGAATATTCTCATAGACATGAGTTTCGAAGCCAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAACGACACTCATATATCGACTCGTGTTATGGGCACATTTGGGTACGCGAGGCCTCTATGCATGCAAGCAATGAAGGATGCAAACTATGAGGTGCTGGCTGATTCACGCACGACCTCGGAGAACGACACAAGCTCCGATACCGCCGACGTGAAGAGGCTCCAAAAGAAAGCGATGGACGGCCGGGAGGAAATAAGCAGCGATTGCGGCGGCACTAGCGAGTATGGACTAAACCCTTTGGCAACAAGCGGCGAGATCAGCTTGAAGACCGGCCGCCAGTCATCCCCAAACGTACGGGCCACCTAA 1017 54.77 MNYNRNNQNEHVVNITPVGGGGQGGEWPQPPPPPPTPPPLGIVSSDMSSNNSGPHGPVLPPPHPSVALGFNKCTFTFDELMAATGGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKSGSGQGGREFAAEVEIISRVHHRHLVSLIGHCLAGERKLLVYEFVPNNNLQFHLRGKGQSPLDWPTRVKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNDTHISTRVMGTFGYARPLCMQAMKDANYEVLADSRTTSENDTSSDTADVKRLQKKAMDGREEISSDCGGTSEYGLNPLATSGEISLKTGRQSSPNVRAT 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4341924 4346033 - Carg27536-RA Car20g00740 168599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00740 338 Pfam Protein tyrosine and serine/threonine kinase 92 244 IPR001245 GO:0004672|GO:0006468
Car20g00740 338 ProSiteProfiles Protein kinase domain profile. 87 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00740 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Car20g00740 338 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Car20g00740 338 MobiDBLite consensus disorder prediction 308 338 - -
Car20g00740 338 MobiDBLite consensus disorder prediction 26 41 - -
Car20g00740 338 MobiDBLite consensus disorder prediction 1 61 - -
Car20g00740 338 MobiDBLite consensus disorder prediction 293 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00740 Car-Chr20:4341924 Car18g00729 Car-Chr18:8428061 1.71E-86 dispersed
Car02g00265 Car-Chr2:1803418 Car20g00740 Car-Chr20:4341924 2.57E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89617 PF07714 PK_Tyr_Ser-Thr 1.10E-31 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00740 - - csv:101217306 395.201