Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00761 ATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTACTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCCATACGGGTTGGGTACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAGGAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGCTATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCGTGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAAAGCGAAAACTTGATTCTAGCGAGCACCATCCATCATCTGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAATGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACCCAGATTAAGCTGATCAGAAACTAA 1107 42.64 MIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4484941 4487088 - Carg23622-RA Car20g00761 168620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00761 368 MobiDBLite consensus disorder prediction 179 199 - -
Car20g00761 368 ProSiteProfiles B3 DNA-binding domain profile. 242 337 IPR003340 GO:0003677
Car20g00761 368 Pfam B3 DNA binding domain 8 67 IPR003340 GO:0003677
Car20g00761 368 Pfam B3 DNA binding domain 245 335 IPR003340 GO:0003677
Car20g00761 368 ProSiteProfiles B3 DNA-binding domain profile. 1 70 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00285 Car20g00761 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00285 Car-Chr2:1925584 Car20g00761 Car-Chr20:4484941 1.05E-14 dispersed
Car12g00479 Car-Chr12:3018448 Car20g00761 Car-Chr20:4484941 1.30E-27 dispersed
Car20g00761 Car-Chr20:4484941 Car20g00981 Car-Chr20:11349543 2.88E-11 dispersed
Car20g00760 Car-Chr20:4479909 Car20g00761 Car-Chr20:4484941 2.70E-60 tandem
Car20g00761 Car-Chr20:4484941 Car07g00717 Car-Chr7:3698910 4.95E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5393 PF02362 B3 4.90E-18 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00761 - - csv:101213446 697.197