Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00803 ATGGAGATTTGGTTCATCATCCTCGTCTCCCTCTGCATCAGCTATGTTCTAAGCTCCATTTTAAGCCATTTCCGAAGCTCCACCAAGCTCCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCGCCTCTCCAATTGGAGTCTTACCTCCGCACCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATTGGCTCTCGCATCTCCATCTTCATAGCTGACCGCACCATTGCCCACAACGCCCTCCTCCAACATGGCGCTCTCTTCGCCGACCGCCCACCACCTCCTCCTTTGACCAAAATCCTCTTCAGCAACCAGCACAGCATCCACTCCGCCCCTTACGGTCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTGTCAGGTCCTACTCTCCTGCTCGCAAGTGGGTTTTGGATATTCTCCTTAAACGCCTTCTCTCCCACTCTGAATCGGGAACTCCCGTCTGTGTTGTTGATCATTTTCAGCACGCCATGTTCTATTTGTTGGTGCTAATGTGCTTTGGGGATAAACTCGACGAACCCAAAATCAAAGAAGTCGAGAATGTGCAGCGTACGATGCTGCTAAATTTTAGTCGATTTGGTCTCCTTAATTTATCGCCTAAATTGACAAAGATTTTCCTTCCAAAACGCTGGGAGGAGTTTCTCCAACTAAGAAAGAACCAAGAGAGAGTCATAATCCCTCTAATCGAAGCAAGAAGGAAGGCCAACCAAAACAGAGGAAACAGAGAAAACAGAGAAGGTAAAGAAGAAGAAGAAGATGAAGATTTCGTGTTGTCGTATGTGGATACACTCCTCGAATTACGCCACCCCGAAGAGGAAAATAGGAAGATAACAGACGGCGAAATGGTCAAAGGATTAAGAAGACACCCACCAGGGCTTTTCCTAGAAGCACGAGGGGTGAAAGAGGATATAGAATTCGAAAACTACCTGATACCCAAGACCGCGACTGTAAATTTCATGGCGACGGAGATGGGTCGGGGTGCAGATGTATGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGGGAGGAGGAGCGGCGGCGTTTGATGTAACGGGGAGCAGAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATGTGTCCGGGATATGGTTTGGGGATTCTTCATTTGGAATATTACTTAGCGAATATGATATGGAGGTTTGAATGGAAGGCTGTGGATGGTGACGACGTTGATCTGTCGGAGAAGGTAGAGTTCACCGTTGTGATGAAAAACCCTCTGAAAGCCATCATAAGTCCCAGCTATGTTCTAAGCTCCATTTTAAGCCATTTTCGAAGCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCCAATCTCCAATTGGAGTCTTACCTTCGCACCGCCGTCGCCAAATATGGCCCCATCGTCACCCTCCGCAGAGGCTCTCGCCTCTCCATCTTCATCGCCGACCACTCAATTGCCCACAAGATCCTCGTCCAAAACGGTGCTCTGTTTTCCGGCCGTCCACCGGCGCAACCTGTTAGCAAGCTCTTAACAAGTAACCAACACAGCATCAGCTCTGCCTCTTACGGCCCACTCTGGCGTCTCCTTCGCCGCAATCTCACTTCCCAAATCCTTCATGCTTCTCGGGTTAAGTCCTATAATCGAGCTCGCAAGTGGGCTTTGGATAATCTTCTTAATCGGCTTGTTTCTTATTCGAAATCTGAAACTCCCGTGACCGTCATCGATCATTTTCATTACGCCATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGGGATAGGCTTGACGAACCCCATATTAGGGAAATCATGGACGTGGAGCGAGCGGTTGTATTGAGTTATGAGCGTTTCAATGTTCTCAATTTCTGGCCTAAATTCACCAAGATTTTGCTCCGAAAACGCTGGCAGACGCTTCTCCAACTAAGAAAGAACCAAGAGGACGTCATAATTCCATTGATTGAAGCTCGTCGGAAGGCCAATCAAAACAGAGGAAACAGAGCAAACAGAGTAAACAGAGCAAACAGAGCCGAAACTGAAGAAGAAAAAGAAGAATTCGTGGTGTCATATGTGGATACCCTTCTCGATTTGGAGATTCCCGACGAGGACAATAGAAAGCTTACCAATGAGGAGATTGTGACCATATGCTCGGAATTCCTCAACGCCGGCACCGACACCACGTCGACGGCCCTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAACACAAACTTTTTGCAGAGATAAAAGGAGTAATGGGAGATAGAACAGGGGAGGAGGTGAAGGAAGAGGATTTGCGGAAGGTTCCATATCTGAAAGCGGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGAAACAGAGTTGGAAAATTACGTGATACCAAAGTATGGGACGGTAGATTTCATGGTGGCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGACCCGGCGGCGTTTATGCCCGAGCGGTTCTTGAAAGGAGGGAAAGAAGAAGAAGAAGAAGTGGCGGAGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGCCCAGGATTTGGTCTGGCGATTCTTCATTTGGAGTATTTCCTTGCTAATTTGGTTTGGCGGTCGGAATGGAAGGCCGTGGAGGGAGACGAAGTTGATCTGTCGGAGAAGTTAGAGCTTACGGTTGTCATGAAAAAGCCTCTGAAGGCAAGAATCTATTCCCGGGGATAA 2880 48.82 MEIWFIILVSLCISYVLSSILSHFRSSTKLPPGPPSIPIISTFLWLRTSPLQLESYLRTAVAKYGPIVTLRIGSRISIFIADRTIAHNALLQHGALFADRPPPPPLTKILFSNQHSIHSAPYGPLWRLLRRNLTSQILHPSRVRSYSPARKWVLDILLKRLLSHSESGTPVCVVDHFQHAMFYLLVLMCFGDKLDEPKIKEVENVQRTMLLNFSRFGLLNLSPKLTKIFLPKRWEEFLQLRKNQERVIIPLIEARRKANQNRGNRENREGKEEEEDEDFVLSYVDTLLELRHPEEENRKITDGEMVKGLRRHPPGLFLEARGVKEDIEFENYLIPKTATVNFMATEMGRGADVWEDPMAFKPERFMGGGAAAFDVTGSREIKMMPFGAGRRMCPGYGLGILHLEYYLANMIWRFEWKAVDGDDVDLSEKVEFTVVMKNPLKAIISPSYVLSSILSHFRSSTKLPPGPPSIPIISTFLWLRTSNLQLESYLRTAVAKYGPIVTLRRGSRLSIFIADHSIAHKILVQNGALFSGRPPAQPVSKLLTSNQHSISSASYGPLWRLLRRNLTSQILHASRVKSYNRARKWALDNLLNRLVSYSKSETPVTVIDHFHYAMFCLLVLMCFGDRLDEPHIREIMDVERAVVLSYERFNVLNFWPKFTKILLRKRWQTLLQLRKNQEDVIIPLIEARRKANQNRGNRANRVNRANRAETEEEKEEFVVSYVDTLLDLEIPDEDNRKLTNEEIVTICSEFLNAGTDTTSTALQWIMANLVKYPEIQHKLFAEIKGVMGDRTGEEVKEEDLRKVPYLKAVVLEGLRRHPPGHFVLPHAVKEETELENYVIPKYGTVDFMVAEMGWDPKVWEDPAAFMPERFLKGGKEEEEEVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFLANLVWRSEWKAVEGDEVDLSEKLELTVVMKKPLKARIYSRG 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4888593 4896121 - Carg26837-RA Car20g00803 168662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00803 959 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 897 906 IPR017972 GO:0005506|GO:0016705
Car20g00803 959 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 386 395 IPR017972 GO:0005506|GO:0016705
Car20g00803 959 Pfam Cytochrome P450 309 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00803 959 Pfam Cytochrome P450 31 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00803 959 Pfam Cytochrome P450 464 950 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00801 Car-Chr20:4860995 Car20g00803 Car-Chr20:4888593 0 dispersed
Car20g00803 Car-Chr20:4888593 Car20g00816 Car-Chr20:5249965 1.19E-12 dispersed
Car20g00802 Car-Chr20:4874257 Car20g00803 Car-Chr20:4888593 4.38E-16 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00803 K24184 - csv:101220777 729.939