Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00831 ATGAGCTGCCATTGGAGCTGCCATTGGAGCTTCAGAGTTCTTGCTTTTCTTCTTCTTCTTCGTCTTCAATCTTCTTGCTATGGACTGAATTTTGATGGGGTTCTCTTGCTTTCCTTCAAGTATGGCGTTTTGGATGACCCTCTTTTTGTTCTTCAGAACTGGAATTACTCCGATGAGACGCCCTGTTCATGGCGGGGAGTTCAATGCTCTGACGGTGGTGGTGGCGGCTCTAGAGTTACAGGTTTGTCTCTACCGAATTCTCAGCTGATGGGCTCTGTTTCTTCTGATCTGGGTCTGATTCAAAACCTTCGATCGGTTGATCTTTCTAATAATTCCTTTAATGGGTCTCTTCCCCGGTCTCTGTTTAACGCTACCATGCTCCGGTTTCTTGATTTGTCGGAGAATTTGATCTCCGGTGAGGTTCCGGCGGCGGTGGGTGGACTTGGGAATCTGCAAGTTCTTAACCTCTCTGGTAATGCTTTGGTCGGGAAGTTTCCGGGTGATCTTGCGGATTTGGGTAATCTTACGGTTCTGTCTCTGAAGAACAATTACATTTCCGGTGAAATTCTCGGTGGGTTTAAGACGGTGGAGGTTTTGGATCTGTCTTCTAATTTGATTGATGGAGCTTTGCCGTCTGATTTTGGTGGCGACAATTTACGTTATTTCAACATCTCGTACAATAAACTTTCCGGCAAAATCCCGCCGGATTTCGCTCATAATATTCCGGCCAACGCCACTATTGATCTCTCCTTCAATAACCTCACCGGAGAAGTCCCTGTTTCCGATGTGTTCATGAACCAAGAAGCAAAATCCTTCACCGGGAATCGCCAGCTCTGCGGCGAGTTAACGACAACCCCATGTTCAATTCCTTCTTCGGCGGCGTCTCTCCCGCCGGCGATCGCTGCCATTCCACTAGACCGAAGTACTCCAGAAACGACATCGCCGGAAAAACAGAGCGAAACTCGGTTCAAACCCTCAACAATCGTCGCCATTGTACTCGGAGACATCGTCGGATTGGCAATTCTGTTCCTCCTCTTCTTCTACGTCTATCACTTGAAGAAAAGAAACAAATCCGTCGAAACACATTTGAAAAACGAAGCCAATTTGGCCAAGGAGAGCTTCTCCACATCCTCATCGGAATCCAGAGGAGTTTCCCGATGGTCCTGTTTAAGAAAAACAGAGGACCCAGAAGAGGGAAACTCCGATCAGGCGAGTGCCGTGTCAATCCCCGGCCACCGTGAGACGGCTGAAGAGGGAGAAGACGGAAACAGAAAGGGGACTTTGGTGACGGTAAACGGCGGAGAGAAGGAGCTGGAACTGGAGGCGCTGCTGAAAGCATCAGCGTACATCCTCGGCGCCACCGGATCAAGCATAACATACAAAGCAGTACTGGAAAACGGGACGGCGTTTGCCGTGAGAAGAATCGGAGACGGCGGAGTGGAAAAATTCAAAGATTTCGAGAATCAAATTCGTGTCGTAGCTAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTTTATTGGGGCATCGATGAAAAGCTCATAATTTATGATTTTGTTCCTAATGGAAGCCTCGCCAATGCTCGTTACAGGAAAGTGGGTTCGTCGCCTTGTCATCTTCCATGGGAGCCTCGATTGAGAATAGCCAAAGGAGTAGCTCGTGGCCTTTCTTATCTCCATGACAAGAAGCATGTCCATGGCAACTTGAGGCCCACCAACATTCTTTTGGGTTTCGATATGGAGCCCAAGATCGGCGATTTCGGTCTCGACAAGCTCTTCTTGGGCGACTCGAGTTACAAGCCTGGTGGCTCAACTCGAAATTTCGGAAGTAAACGGTCCACTGCATCTCGAGATAGCTTCCAAGATTTCGTTACAGGACCAAGTCCAAGCTCGATTAATGGAGTGTCGCCGTACTTGCCACCAGAGTCACTTCGGAGCTTGAAGCCCAATCCAAAATGGGATGTGTACTCTTTTGGAGTGATATTGCTCGAGCTATTGACAGGGAAGATCATCGTGTTGGATGAGTTGAGCCAGGTACTTGGACTTGCAGTCGAAGATAAGAGTCGAGCCCTAAAAATGACTGACATGGCGATTCGAGGTGAGATGGAGGGGAAAGAAGAAGCTTTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCACCTAACCCACAAAAGAGACCATCCATGAAGGAATGCTTGCAAGTTTTGGAGAAATTTCCAACCATATCCACTTCATCACACTATTATGGTCTCTAA 2262 47.66 MSCHWSCHWSFRVLAFLLLLRLQSSCYGLNFDGVLLLSFKYGVLDDPLFVLQNWNYSDETPCSWRGVQCSDGGGGGSRVTGLSLPNSQLMGSVSSDLGLIQNLRSVDLSNNSFNGSLPRSLFNATMLRFLDLSENLISGEVPAAVGGLGNLQVLNLSGNALVGKFPGDLADLGNLTVLSLKNNYISGEILGGFKTVEVLDLSSNLIDGALPSDFGGDNLRYFNISYNKLSGKIPPDFAHNIPANATIDLSFNNLTGEVPVSDVFMNQEAKSFTGNRQLCGELTTTPCSIPSSAASLPPAIAAIPLDRSTPETTSPEKQSETRFKPSTIVAIVLGDIVGLAILFLLFFYVYHLKKRNKSVETHLKNEANLAKESFSTSSSESRGVSRWSCLRKTEDPEEGNSDQASAVSIPGHRETAEEGEDGNRKGTLVTVNGGEKELELEALLKASAYILGATGSSITYKAVLENGTAFAVRRIGDGGVEKFKDFENQIRVVAKLVHPNLVRVRGFYWGIDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEPRLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPSSINGVSPYLPPESLRSLKPNPKWDVYSFGVILLELLTGKIIVLDELSQVLGLAVEDKSRALKMTDMAIRGEMEGKEEALLSCFKLGYSCASPNPQKRPSMKECLQVLEKFPTISTSSHYYGL 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5532013 5534786 - Carg25492-RA Car20g00831 168690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00831 753 ProSiteProfiles Protein kinase domain profile. 445 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00831 753 Pfam Leucine Rich Repeat 102 121 IPR001611 GO:0005515
Car20g00831 753 Pfam Leucine Rich Repeat 218 239 IPR001611 GO:0005515
Car20g00831 753 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Car20g00831 753 MobiDBLite consensus disorder prediction 393 428 - -
Car20g00831 753 Pfam Leucine rich repeat 144 185 IPR001611 GO:0005515
Car20g00831 753 Pfam Protein kinase domain 451 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00340 Car20g00831 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00445 Car-Chr4:2515623 Car20g00831 Car-Chr20:5532013 0 dispersed
Car16g00307 Car-Chr16:1884400 Car20g00831 Car-Chr20:5532013 4.78E-160 dispersed
Car16g00308 Car-Chr16:1886318 Car20g00831 Car-Chr20:5532013 1.01E-48 dispersed
Car18g00920 Car-Chr18:9971576 Car20g00831 Car-Chr20:5532013 6.22E-135 dispersed
Car20g00831 Car-Chr20:5532013 Car07g01258 Car-Chr7:7806626 6.13E-88 dispersed
Car02g00340 Car-Chr2:2407856 Car20g00831 Car-Chr20:5532013 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89618 PF00069 Pkinase 1.10E-28 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00831 - - bhj:120088533 1259.97