Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00833 ATGGATTTTCTCTTTGTTTTGCTGCTCCTCCTTCTTGTTTTCCTTTTCCTGCAACAATTCATTACCCGCCGGCGAAATCTCCCGCCGAGCCCACCGTCTTTCCCGATCATCGGCCATCTCCACCTCCTTCAACGCCCAATCCACCGGAACTTCCACAACATCGCCGCCAAATACGGACCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCCCTCATAGTCTCTTCACTCCAACTAGCCGAAGAATGCTTCACCAAAAACGATGTCGTTTTCGCCAACCGTCCGCGTTTACTCATCGGAAAATACCTCGGCTACAACTTCACCACCATCTCCACCACACCTTTCGGCGACCACTGGCGGAACCTCCGTCGTCTCACCTCTATGGAGATATTTTCCACGGCGCGTCTCAACGCAGCTCTCAGCATCCGTAAGGATGAAATCCGGCGATTATTGGTCAAACTCCATTCCGAATCGTTTGCTAAAGTGGAGTTGAAATCGATGTTTTCAGAATTGAGTTTCAACGTTGTGATGAGGGTTGTGACCGGAAAACGGTACTTCGGCGAGGAGGTTTCCAATGAAACAGAGGCGAGGGAGTTCAGAGAGCTTATGGATGAAACATCGCGTCATGGAGGAGCGTCGAATTGGGTCGATTTCATGCCGATTTTGAAATGGATTGGGTTTGGTGAATATGAGAAGAGTTTAGCCAAATTAACGAAAAGGGCCGATAAATTTATGCAGAAATTGGTTGAAGATCGCCGGAATCAGACAGGATTGCAAATAGAAAAACAGAGTACTCTGCTTGATCGGCTTCTGGAACTTCAGGCATCTGAACCGGAATATTACTCCGATGAGATAATCAAAGGGGTCATTCTGGTTTTGCTGCGTGCCGGAGCTGACTCAACCTCTGTGACCATGGAATGGGCAATGACTCAATTACTCAACAATCCGGAGGTGATATCCAAAGCCAAAGCCGAGATTGACACCAAGATCGGTCGAGATCGACTCATTGATGAAGCAGATCTCGCTAACCTCCACTACCTTCAAGCCATTATTTCTGAGACCTTCCGGTTGCACCCTGCAGCGCCAATGCTCCTCACACACTATTCCTCCAATGACTGCACCGTCGCAGGCTACGATGTTCCTCGTGGGACGATGTTGTTGGTCAATGCTTGGGCAATTCACAGAGACCCCAAGCTGTGGGATGACCCCATGAGCTTCCGACCTGAGAGATTCTTAGGGGAAGGGAATGAGTTGCTGTGGAACAAGTTAATTCCTTTTGGGATGGGAAGGAGGGCTTGTCCTGGGGAAACTATGGCGCTAAGGTTGATAGGATTGAGTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAGAATGTTGGATATGAAAAGGTAGACATGACTGAAGGTGGAGGTATCACCATTCAAAAAGTTCAGCCTCTGGAAACCATGTGTAGAGCTCTCCCAATTATGGATAAAGTTCTATCAAATGGTTTGGACTAA 1500 48.07 MDFLFVLLLLLLVFLFLQQFITRRRNLPPSPPSFPIIGHLHLLQRPIHRNFHNIAAKYGPIFTLRFGSRLALIVSSLQLAEECFTKNDVVFANRPRLLIGKYLGYNFTTISTTPFGDHWRNLRRLTSMEIFSTARLNAALSIRKDEIRRLLVKLHSESFAKVELKSMFSELSFNVVMRVVTGKRYFGEEVSNETEAREFRELMDETSRHGGASNWVDFMPILKWIGFGEYEKSLAKLTKRADKFMQKLVEDRRNQTGLQIEKQSTLLDRLLELQASEPEYYSDEIIKGVILVLLRAGADSTSVTMEWAMTQLLNNPEVISKAKAEIDTKIGRDRLIDEADLANLHYLQAIISETFRLHPAAPMLLTHYSSNDCTVAGYDVPRGTMLLVNAWAIHRDPKLWDDPMSFRPERFLGEGNELLWNKLIPFGMGRRACPGETMALRLIGLSLGLLIQCYEWKNVGYEKVDMTEGGGITIQKVQPLETMCRALPIMDKVLSNGLD 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5636520 5638019 - Carg25494-RA Car20g00833 168692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00833 499 Gene3D Cytochrome P450 16 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 Coils Coil 234 254 - -
Car20g00833 499 Pfam Cytochrome P450 28 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Car20g00833 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 492 - -
Car20g00833 499 SUPERFAMILY Cytochrome P450 28 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 5 492 - -
Car20g00833 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00833 499 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00029 Car-Chr8:139176 Car20g00833 Car-Chr20:5636520 2.71E-178 dispersed
Car17g01280 Car-Chr17:9700159 Car20g00833 Car-Chr20:5636520 5.98E-178 dispersed
Car20g00833 Car-Chr20:5636520 Car20g00835 Car-Chr20:5659070 9.87E-178 dispersed
Car20g00833 Car-Chr20:5636520 Car20g00834 Car-Chr20:5655972 5.20E-37 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00833 K13260 - csv:101210967 758.059