Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00835 ATGGATATGCTCTTCCTTTCCATTTCCCTCTCTATGCTATCTATCTTTCTAGCCTTGAGCTTTCTTCTTCGACCACCTCGCCAAAACCTTCCACCAACACCATTTTTTTCTCTTCCAATTATTGGTCATCTCCATCTCATCAAACACCCTCTCCATCGAATCCTTCACAACCTCTCCAAAACCTATGGCGACATCTTCTCCCTCCGATTTGGTTCACGGCTCGTTGTAGTTGTATCATCGCCTTCGGTCGTACAAGAATGCTTTACAAAGAACGATATTGTTCTTGCAAATCGCCCATTGTTGGGCACTGGAAAGCACTTAGCATACAACCATACCACCATGGCCGTCGCCCCTTACGGCGATCACTGGCGAAACCTTCGTCGAATTGGTGCCCTCGAGATTTTCTCTATGAGTCGGCTAAATCTATTCATGGGAATTCGAGAGGATGAAGTTAAACGCTTGATGCTTCGATTACGTGGGAGTTCGTTGGAAGAATTCACACTAGTCGAGCCCGAGACCATGTTCTTAGATCTTATGTACAATGTTATTATGAGAATGGTGGCGGGGAATAAGCCTTACGAACACGATAAGGGACGATCGAGGGAATTTAGAGAGCTCGTGACAAAGATTATGGCGGTTGGTGGGACAACAAATCCAGGAGACTTCATACCAATATTGAATTGGATTGATCCCACAGGTTTAGAGAAGAAGATTATGAAGCTTGGACGGAAAATGGATGAACTTCTTCAAGAATTAGTTGATGGGATAAGATATCAAAAGGGTGCAGGAAACACTATGATTGATCGCTTACTTCATTTGCAAAAAACTGACCCTCAAAATCATACCGACCAAATTATCAAAGGCCTAATACAAATCATATTAATAGCAGGGATTGACACAACAGCCGTAACCTTAGAATGGGCGCTCTCGCATCTACTCAACAATCCAGAGGTTTTGGAGAAAGCAAAAGCAGAGATAGACAGTTCCATTGGACAAGAGCGTCTAGTGAACGAAGCCGATTTGTCGAGTTTGAATTACCTGCAAGGAATAATTTCGGAGACTCTAAGGTTGACCCCAGCAGCTCCTTTGCTAGTGCCACATTGCGCTTCTAAAGACACTAAAATTGGAGGGTATGATGTACCACGTGACACGATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCAAGCCTTTGGGAAGATGCCACCCGTTTTAAGCCTGAAAGGCATGCAAACCCTATTGGAATTGACTCATATAAATTTCTACCATTTGGGTTGGGGAGGAGAGCCTGCCCTGGAATAGGAATAGCTCAACGAATGGCTACCTTAACTTTGGGAATGTTGATTCAATGCTTTGAGTGGGAAAGAGAGGGCAGTTCATTGGTTGATATGAGTGAAGGTGAAGGGGTTACTATGCCCAAAGCTCAACGATTGGTAGCCAAGTGTAAACCACGTCCAATCATCAAAACCATTTTTACCGAAGCAGTTCATCACAATATCTGA 1506 43.56 MDMLFLSISLSMLSIFLALSFLLRPPRQNLPPTPFFSLPIIGHLHLIKHPLHRILHNLSKTYGDIFSLRFGSRLVVVVSSPSVVQECFTKNDIVLANRPLLGTGKHLAYNHTTMAVAPYGDHWRNLRRIGALEIFSMSRLNLFMGIREDEVKRLMLRLRGSSLEEFTLVEPETMFLDLMYNVIMRMVAGNKPYEHDKGRSREFRELVTKIMAVGGTTNPGDFIPILNWIDPTGLEKKIMKLGRKMDELLQELVDGIRYQKGAGNTMIDRLLHLQKTDPQNHTDQIIKGLIQIILIAGIDTTAVTLEWALSHLLNNPEVLEKAKAEIDSSIGQERLVNEADLSSLNYLQGIISETLRLTPAAPLLVPHCASKDTKIGGYDVPRDTIVLINAWAIHRDPSLWEDATRFKPERHANPIGIDSYKFLPFGLGRRACPGIGIAQRMATLTLGMLIQCFEWEREGSSLVDMSEGEGVTMPKAQRLVAKCKPRPIIKTIFTEAVHHNI 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5659070 5661432 - Carg25496-RA Car20g00835 168694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00835 501 Pfam Cytochrome P450 32 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00835 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00833 Car-Chr20:5636520 Car20g00835 Car-Chr20:5659070 9.87E-178 dispersed
Car20g00835 Car-Chr20:5659070 Car20g00839 Car-Chr20:5693690 0 dispersed
Car20g00838 Car-Chr20:5681117 Car20g00835 Car-Chr20:5659070 3.07E-125 dispersed
Car20g00835 Car-Chr20:5659070 Car20g00836 Car-Chr20:5662798 9.46E-97 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00835 K13260 - csv:101204413 775.778