Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00849 ATGGAGTGGGTTCGAGGCCACCAACTGGGTCGCGGAAGTTTTGCCACAATCTATTTAGCCAAGCTTACAAATGGGTCCGATCAGCATCTGCCATTAATGGCGGTCAAATCCTCTGTTTCTCAATCCTCTGTTTCGCTCAAGAACGAGAAGCAAATTCTGGATCGAATTGGGAGTTGCCCGCAAATCATCGCTTGTTTTGGGGATGGATTTAGTGTTGAGAAAGATGGGGAGAAGTATTATAATCTGTTATTGGAGTATGCCAATGGCGGAAGCCTTGCGGATGCTCTGAAAATCCACGGCGGTGGGTTGCCGGAATTCGATGTTCGAAGGTACACGAGGGGGATTCTTTGTGGGCTTCGGTATATTCATTGCAATGGGTTTGTTCATTGCGATTTGAAGCTTTCCAATGTCTTAATTTTTGGGAATGGCGATGTTAAGATCGCTGATTTTGGGCTTGCTAAACCCGCGGGAAAAATGACGGCGGCGGAAACAGAGGAGAGATTTCAGTGGAGAGGGACTCCGATGTATATGTCACCGGAGAATGTCAACGGCGGTGAGTATGAGCCGCCGTGTGATATTTGGGCATTAGGTTGCGCCGTCGTGGAGATGGTGGCAGGAAAGCCGGCGTGGAGAGTTGGGCCGGAAACGGATATATTCGCGCTGATGATGAGAATCGGAGTCGGCGACGAAGTACCGGAGGTTCCGGAGAATCTATCAGCGGAGGGGAAAGATTTTCTCCGGCGATGTTTTGTCAAGGATCCTAGAAATCGGTGGACGGCGGAGATGCTTTTGAATCACCCATTTGTCGCTGGTGGCGGCGGTACTGTTACATTGAAGGAAGCGGAACTGGCGACGGAGTCGCCGACGGGTCCTTTCGATTTCCCGGAATTCGTTTGCTCCGAACAAGGTCCGGAAGAGTTGAGTTCGTGTTGGGGTAATTCGTCGCCGGAGATGATGAGGAGGAGGGTGGGGGAATTGGTAACCGAGAAGCCATTGCATTGGTCTGTGATGGATAGTTGGGTGACATTTGAGAAGCTGATAATGGAGTATTCCACGCTTCTGATTGCGAGACAGTTTTTGTCACTCTGTATATAA 1095 49.95 MEWVRGHQLGRGSFATIYLAKLTNGSDQHLPLMAVKSSVSQSSVSLKNEKQILDRIGSCPQIIACFGDGFSVEKDGEKYYNLLLEYANGGSLADALKIHGGGLPEFDVRRYTRGILCGLRYIHCNGFVHCDLKLSNVLIFGNGDVKIADFGLAKPAGKMTAAETEERFQWRGTPMYMSPENVNGGEYEPPCDIWALGCAVVEMVAGKPAWRVGPETDIFALMMRIGVGDEVPEVPENLSAEGKDFLRRCFVKDPRNRWTAEMLLNHPFVAGGGGTVTLKEAELATESPTGPFDFPEFVCSEQGPEELSSCWGNSSPEMMRRRVGELVTEKPLHWSVMDSWVTFEKLIMEYSTLLIARQFLSLCI 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6095207 6096352 + Carg28225-RA Car20g00849 168708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00849 364 Pfam Protein kinase domain 5 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00849 364 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car20g00849 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Car20g00849 364 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00496 Car-Chr3:5114316 Car20g00849 Car-Chr20:6095207 5.50E-62 dispersed
Car08g00486 Car-Chr8:3102136 Car20g00849 Car-Chr20:6095207 1.10E-40 dispersed
Car17g00864 Car-Chr17:7273457 Car20g00849 Car-Chr20:6095207 2.14E-62 dispersed
Car17g01164 Car-Chr17:8960205 Car20g00849 Car-Chr20:6095207 2.05E-16 dispersed
Car20g00849 Car-Chr20:6095207 Car07g00274 Car-Chr7:1447122 9.13E-64 dispersed
Car07g00694 Car-Chr7:3562953 Car20g00849 Car-Chr20:6095207 3.54E-132 transposed
Car02g00356 Car-Chr2:2582420 Car20g00849 Car-Chr20:6095207 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89619 PF00069 Pkinase 1.10E-53 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00849 - - csv:101214756 572.778