Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00884 ATGGAGGAGGCGACGATATCTGTGAAAACGCTGCCGTTTCTGGCTTTCTTCTTCCTTCTTGGACTTCATAACACCTTCTCCTACACAGACCCAAACGATGTTCAAGTCCTGCTATCGTTGAAAGAGGAATGGAAGAACACACCACCAACATGGAAGACATCAGTTGATCCGTGTGGAGATCTCTGGGAAGGAGTTACTTGCGATGGTTCTAGAGTCACTGAACTAAAATTGCCGTCTATGGGCCTTGAAGGTCATCTTAGCGGCGCCATTGGAGACCTTACTGAACTAACAACATTGGACCTGTCATTTAACGAAAATCTCACTGGTCCGCTCTCTCCTCGGTTGGGGGATTTGCGAAATTTGCGGTCCTTAATCCTAGCAGCATGTGGCTTCAGTGGGAATATTCCCGAACAGTTGGGCAACCTTACTCAGTTGATGTCCTTGGCTTTGAATTCGAACAAACTCATTGGCCCTATACCGCCTACACTTGGAAAACTCTCCAAACTTGTTTTGCTAGATTTGATGGAGAATAAGTTGAATGGACCTCTCCCTGTATCAACTTCTGATTCCCCAGGTCTGGACCTTCTTCACCAAGCACAACACTTTCACTTGAGTAAGAACAAGCTATCAGGCTCTATACCACCTAAGCTTTTTAGCGCTGATATGAAGTTAATACACATAGTGTTTGATCAAAATCAGTTTTCTGGGAGTATTCCACAAACCTTGGGACTTGTTAACACCCTTGAAGTTCTCCGACTTGATCGGAACTCTCTAACAGGAATGGTCCCATCAAATCTCACCAAATTAAGACAGATCATGCACTTGAATTTAGCACACAATAAACTAACAGGTCCGTTGCCAAATTTAACTCAAATGACTTCACTATGTGTTGTGGACCTGAGTAACAACTCATTTGATACATCAGCAGCCCCGGATTGGTTCTCAAGCTTACCATCTCTCACCACTTTGTAG 972 44.14 MEEATISVKTLPFLAFFFLLGLHNTFSYTDPNDVQVLLSLKEEWKNTPPTWKTSVDPCGDLWEGVTCDGSRVTELKLPSMGLEGHLSGAIGDLTELTTLDLSFNENLTGPLSPRLGDLRNLRSLILAACGFSGNIPEQLGNLTQLMSLALNSNKLIGPIPPTLGKLSKLVLLDLMENKLNGPLPVSTSDSPGLDLLHQAQHFHLSKNKLSGSIPPKLFSADMKLIHIVFDQNQFSGSIPQTLGLVNTLEVLRLDRNSLTGMVPSNLTKLRQIMHLNLAHNKLTGPLPNLTQMTSLCVVDLSNNSFDTSAAPDWFSSLPSLTTL 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 8680461 8683292 - Carg27800-RA Car20g00884 168743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00884 323 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01007 Car-Chr14:8275514 Car20g00884 Car-Chr20:8680461 7.23E-97 dispersed
Car20g00884 Car-Chr20:8680461 Car04g02908 Car-Chr4:21882484 3.10E-13 dispersed
Car20g00884 Car-Chr20:8680461 Car14g00001 Car-Chr14:1758 3.19E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00884 - - csv:101220026 403.675