Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00895 ATGAACATAGAGAGTTCGAGGGAGATGGAAAAGAAGCCTTATTTTGCAGTGCTACTCAGACATAGCATTTATGCAGGAATGTTTCTTCTCTCCAAAGCTGCCTTTGATGGCGGAATGAACAACTTTATCTTTGTTTTCTATAGGCAAGCCATAGCCACTGTGTTCTTGTTGCCCATCGCTTTGTATTTTGAATGGAAAACAGCGCCTCCCCTCTCATTTGTCACCTTCGCCAAGATCTTTATGCTTTCTTTATTTGGTTTAGCTGCAGCAACTGTAAATGCTATTCCTGTTATTACGTTTCTTTTTGCCCTTCTATTCAGGGAAAAGAAAATGTTTGGCAGGGTGGAGACGTTGAGGCTAAAGTCAATAGTAGGATTAGCAAAGCTTGGAGGAATAGTTTTTTGTATGGGCGGTGTGTTGGTTTTGGTTTTCTACAAAGGCCCTCAACTCACATTCTTTAACAATCACCACCTTTTTTCTATACACAAACATCAACAAAATCCACTTCATGTTGCTTCAACCCAAACTTGGATTAAGGGTTGCTTCCTAATGATGGCTTCAAATACCTTGTGGGCTTTATCACTTGTTCTTCAGGCGTTTGTACTAAAATGTTATCCTTCGACACTTCTATTCACTAGTCTTCAGTGCCTTGTTAGCTCATTTCAATCCTTCGTTATTGCCATTGCTTTGGAGAGAAACCTTGACGAATGGAAATTGTCTTGGAATCTTAGACTTCTTTCGGTCGCATATTGTGGAATAGTAGCAACTGGGGTTACATATTCTCTTCAAACATGGGTCATTAAGAAGAAAGGACCAGTTTTTTTAGCCATGTCAACGCCAATTATTCTCGTCATTACAACTGTTTCTTCTGCCGTTCTTCTTGGCGAGAGTATCAACCTTGGAAGTGGTATAGGTGGGCTCTTACTGATTGGAGGTCTCTACAGTGTGCTATGGGGAAAGAACAAAGAGCAAATAGTTAATGAAGAGCTAAAAGAAATTGACAAAGAATGCAGTTTGCCAGTGAGGGGAAATGAGACATCTCAATCTTGA 1050 40.19 MNIESSREMEKKPYFAVLLRHSIYAGMFLLSKAAFDGGMNNFIFVFYRQAIATVFLLPIALYFEWKTAPPLSFVTFAKIFMLSLFGLAAATVNAIPVITFLFALLFREKKMFGRVETLRLKSIVGLAKLGGIVFCMGGVLVLVFYKGPQLTFFNNHHLFSIHKHQQNPLHVASTQTWIKGCFLMMASNTLWALSLVLQAFVLKCYPSTLLFTSLQCLVSSFQSFVIAIALERNLDEWKLSWNLRLLSVAYCGIVATGVTYSLQTWVIKKKGPVFLAMSTPIILVITTVSSAVLLGESINLGSGIGGLLLIGGLYSVLWGKNKEQIVNEELKEIDKECSLPVRGNETSQS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 9476414 9488313 - Carg27414-RA Car20g00895 168754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00895 349 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00409 Car-Chr2:3159752 Car20g00895 Car-Chr20:9476414 5.33E-114 dispersed
Car04g02357 Car-Chr4:18947473 Car20g00895 Car-Chr20:9476414 1.81E-89 dispersed
Car20g00895 Car-Chr20:9476414 Car20g00939 Car-Chr20:10285094 0 dispersed
Car20g00895 Car-Chr20:9476414 Car20g00937 Car-Chr20:10238436 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00895 - - csv:101203024 413.305