Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00907 ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGCCTTTGAATCTGAATTAGGCGGTGTCATTCCGGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGATCAAGAACTTCAGCATTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTTCTTGTAATGATCATGTTGCTCTCACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACGGTAGCAGGCAACGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACGACCTGCGACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTTGA 702 46.01 MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDTTCDRVIGDRERFQIEGGSTKLHC 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 9829432 9832732 + Carg24301-RA Car20g00907 168766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00907 233 Hamap Translation initiation factor 6 [eif6]. 1 233 IPR002769 GO:0042256|GO:0043022
Car20g00907 233 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00473 Car-Chr2:3675319 Car20g00907 Car-Chr20:9829432 1.21E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00907 K03264 - dcr:108209985 398.667