Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00926 ATGGCCGCCCTCTCCTTCCTCTCCTTCCTCTCCCTCTTCTTCTTCCTCTCCCTCTCCTCCGCCGTCCACCACCACCTCCCATCCCATTTCACCAACTCTCCCTCTTCCGAGGAAACATTCCGTGCCTGCAAGGCCACACGTTTCCCCGAACAATGCGGATCTTCCCTTTCTCATTCCCCTTCTCTTCCTCCCAATCCCACCACTCTCCAGATCATTCAATCCGCCATCGCCGTCTCCTCTGACGGTCTAGCCTCCGCGAAGTCCATGGTCAAGCAGATTCTCGATTCCTCTACCGATAGTCCGAATCGAACCACCGCTGCTAAGAATTGCCTCGAGGTTTTGCGGTTTTCCGAGTATCGAATTTCTCTTACCAACGATGCTGTTCGGCGAGGTCGAACCAAGGACGCGCGCGCTTGGATGAGCGCGTCTCTTCTCTACCATTACGATTGCTGGTCCGCGCTTAAGTACGCCAATGATACCCAATCTGTGAACAAAACCATGGCGTTTCTTGACTCTCTCATTGGCCTTACCAGTAACGCCCTTAGTATGTTGGCGGCTTACGACATTTCTGGTAACGATACGGCGGCGTGGACGCCGCCGAGGACTGAGCGCGATGGATTCTGGGAAGGTAGTAGCGGCGGATCTGGGTTAGGGTTTAGCGGCGGGTTCCCATCGAAGGTAGATGCTAGCGCGACGGTGTGCAAAGACGGTGCCGGGGGATGTTATAAAACTGTTCAGGAAGCTGTGAACGCGGCGCCGGATAATGCGATGGGGAAGCGATTTGTGATTCATATTAAGGAAGGCGTTTATGATGAAATCGTGAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTCTTGGGAGATGGGATGGGGAAAACGGTGATCACGGGGTCTTTGAATGTCGGCCAGCCTGGGATTTCCACTTACAACACTGCCACCGTCGGTGAGTTTTTCTTCCTTTTTCTTCAAATTCTTAGCTTAGCTGTTGTTGACAATGCCATCTATTTCAATTTGACTTGA 1020 52.55 MAALSFLSFLSLFFFLSLSSAVHHHLPSHFTNSPSSEETFRACKATRFPEQCGSSLSHSPSLPPNPTTLQIIQSAIAVSSDGLASAKSMVKQILDSSTDSPNRTTAAKNCLEVLRFSEYRISLTNDAVRRGRTKDARAWMSASLLYHYDCWSALKYANDTQSVNKTMAFLDSLIGLTSNALSMLAAYDISGNDTAAWTPPRTERDGFWEGSSGGSGLGFSGGFPSKVDASATVCKDGAGGCYKTVQEAVNAAPDNAMGKRFVIHIKEGVYDEIVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGISTYNTATVGEFFFLFLQILSLAVVDNAIYFNLT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 10040547 10041566 + Carg24321-RA Car20g00926 168785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00926 339 Pfam Pectinesterase 231 315 IPR000070 GO:0030599|GO:0042545
Car20g00926 339 Pfam Plant invertase/pectin methylesterase inhibitor 42 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00926 Car-Chr20:10040547 Car07g00252 Car-Chr7:1371909 6.36E-22 dispersed
Car20g00926 Car-Chr20:10040547 Car02g00926 Car-Chr2:6557197 2.20E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00926 - - csv:101221165 468.003