Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00937 ATGAACATAGAGAGTTTGAGGAAGATGGAAAAGAAGCCTTATTTTGCAGTGCTACTCAGACATAGCATTTATGCAGGAATGTTTCTTCTCTCCAAAGCTGCCTTTGATGGCGGAATGAACAACTTTATCTTTGTTTTCTATAGGCAAGCCATAGCCACACTGTTCTTGCTACCCATCGCTTTGTATTTTGAATGGAAAACTGCGCCTCCCCTCTCATTTGTCACCTTTGGCAAGATCTTTATGCTTTCTTTATTTGGGATCACGGCAAGTCTCGATCTTCAAGGGGTTGCTCTTATTTATACATCAGCAAGTTTAGCTGCAGCAACTGTAAATTCTATTCCGGTCTTTACCTTTCTTTTCGCTCTTCTATTCAGGTTGGAAGTGTTGAGGTTAAGGTCAATAGTAGGATTAGCAAAGGTTGGAGGAATAGTGTTTTGTACGGGCGGTGTGTTGGTTTTGGTGTTCTACAAAGGCCCTCAGCTCACTCTCTTTAACAATCACCACCTTTTTACTATACATAATCAACATCCACTTCATGATGCTTCAACCCACACTTGGTTAAAGGGTTGCCTCCTAATGATGGCTTCAAATATCTTATGGGCTTTATCACTTGTTCTTCAGGCGTTCGTACTAAAAAGTTATCCTTCAACGCTTCTTTTCACTACCCTTCAATGTCTTGTTAGCTCGTTTCAATCGTTTATTGTTGCCATTGCTTTGGAGAGAGACCTTGACGAATGGAAATTGGGTTGGGATCTAAGACTTCTTGCAGTTGTATATTGTGGAATAGTGGCAACTGGGGTTACGTATTCTATTCAAACGTGGCTCATTAAGAAGAAAGGGCCCGTTTTCTTAGCCATGTCAACACCAATTGTTCTTGTCCTTACAACTCTTGGTTCGGCCTTTCTTTTTGGCGAGAATATCAGCCTTGGAAGTGGTATAGGAGGGCTGTTATTGATCGCAGGTCTGTACAGTGTGCTATGGGGAAAGAGCAAAGAGCTGAAGCTCAATTTAGGGCCAAAAGAAATAGACAGAGAATGCAGTTTGCCAGTGAAAGGAAGCGACACAACTAAATCATGA 1077 41.6 MNIESLRKMEKKPYFAVLLRHSIYAGMFLLSKAAFDGGMNNFIFVFYRQAIATLFLLPIALYFEWKTAPPLSFVTFGKIFMLSLFGITASLDLQGVALIYTSASLAAATVNSIPVFTFLFALLFRLEVLRLRSIVGLAKVGGIVFCTGGVLVLVFYKGPQLTLFNNHHLFTIHNQHPLHDASTHTWLKGCLLMMASNILWALSLVLQAFVLKSYPSTLLFTTLQCLVSSFQSFIVAIALERDLDEWKLGWDLRLLAVVYCGIVATGVTYSIQTWLIKKKGPVFLAMSTPIVLVLTTLGSAFLFGENISLGSGIGGLLLIAGLYSVLWGKSKELKLNLGPKEIDRECSLPVKGSDTTKS 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 10238436 10242744 - Carg28148-RA Car20g00937 168796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00937 358 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020|GO:0016021
Car20g00937 358 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car20g00937 Car-Chr20:10238436 Car20g00939 Car-Chr20:10285094 1.04E-171 dispersed
Car20g00937 Car-Chr20:10238436 Car20g00938 Car-Chr20:10253147 4.02E-61 tandem
Car04g02357 Car-Chr4:18947473 Car20g00937 Car-Chr20:10238436 1.36E-95 transposed
Car20g00895 Car-Chr20:9476414 Car20g00937 Car-Chr20:10238436 0 transposed
Car02g00409 Car-Chr2:3159752 Car20g00937 Car-Chr20:10238436 4.79E-126 wgd
Car20g00937 Car-Chr20:10238436 Car03g00965 Car-Chr3:7481299 1.27E-98 wgd
Car20g00937 Car-Chr20:10238436 Car07g00768 Car-Chr7:4005272 7.09E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00937 - - cpep:111786268 488.034