Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car20g00945 ATGGACCTCTCTTCCCTTCCCTCCAAAGACACCACTTGGTGGCTCTTCACCCTCCCTCACTTCCTCCCATCCCAACCCTCTCCTCTCCTCCTCCTCCTCGCTTTTCTCTCCCTCGCCTTCCTCTCCGCCCTTCTCGCCACAGCCGGCACTGCCTGGCCCAATGGAAGGAACCATAGAGGCCAACGTCCCATCCCCGGCGCCCGCGGCCTTCCAATTCTCGGCAGCTTGTTCTCTCTCACCCACGGCCTTCCCCACCGGACTCTGGCTGCCATGGCTGCAGCCACAGGCAGCTCTCAGCTAATGGCCTTCAGTCTAGGCTCCACCCCTGTTGTGGTTACCTCCGACCCTCATACAGCCAAGGAGATTCTAACCTCACCCCACTTCGCTAACCGCCCCCTCAAGCAGTCCGCCAAGAGTCTAATGTTCGGCCGAGCCATAGGGTTCGCCCCAAACGGCACCTACTGGCGTCTACTGAGGCGAATCGCATCGACCCACTTATTCTCTCCCAAACGTATCGCCGCCCACGAACCCGCTCGCCAGCTCGAATGCGCCGCCATGCTACAAACCATTCACAACCAACAAACCCTTCACGGAGCCGTTTCCTTACGAAAACACCTCCAAGCCGCTGCCTTGAACAACGTGATGTGGAGCGTATTTGGAAAGCGGTTCGACCCGACCGATCCCAAATTAGAAACGGTTCGCGAGTTGGTTCGTGAAGGGTTCGAGCTGCTCGGTGCGTTTAATTGGTCGGATTATCTCCCCTGGCTTAGTGGATTCTACGACCCTGGTCGTATCCGCCACCGCTGCGCCCAACTCGTCCCTAAAGTTAATGAATTTGTCCGCGGCGTAATTGATGAGCACCGCCGCGGTGTAGCTCCGTCGGATGATTCCGATTTCGTCGACGTTTTGCTGTCTCTCGACGGCGATGAAAAGCTCAACGAGGATGACATGGTGGCTGTCTTATGGGAAATGATTTTCCGGGGTACGGACACGACGGCGCTGCTGACGGAGTGGGTGGTGGCGGAGCTAATTTTACATCCGGAGATACAGGGAGAAGTCGCGAGGGAAATCGCCACCGCTGTGGACGGAAGTAGCCTCTCAGACGCTGACGTGGCGAATCTGCCGTACTTACAGGCGGTGGTGAAGGAGACACTGCGGCTACACCCACCAGGTCCACTACTCTCGTGGGCCCGCCTCTCTTCGTCGGATGTCCACCTCAGCAACGGCATGCTTATCCCAGAGAACACAACCGCCATGGTCAACATGTGGGCCATAACGCACGACCCCCACGTATGGGAAGATCCACACGTGTTCAAGCCAGGGAGGTTCGTGGGTGCTGACGTGGACATCAGAGGCTGCGACCTCCGACTAGCGCCGTTCGGAGCAGGGCGGAGGGTGTGCCCAGGGAAGAATCTGGGGCTGGTCACGGTCACACTGTGGGTGGCTAAGCTGGTCCATCACTTTAAATGGGGTCCGGACCCATGCGCCCCAGTGGACCTGAGTGAGGTGCTGAAGCTCTCGTGTGAGATGAAGCATCCGCTAAGTGCGGTGGCAGTGACAAGAAATGGATTTTAG 1575 58.16 MDLSSLPSKDTTWWLFTLPHFLPSQPSPLLLLLAFLSLAFLSALLATAGTAWPNGRNHRGQRPIPGARGLPILGSLFSLTHGLPHRTLAAMAAATGSSQLMAFSLGSTPVVVTSDPHTAKEILTSPHFANRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASTHLFSPKRIAAHEPARQLECAAMLQTIHNQQTLHGAVSLRKHLQAAALNNVMWSVFGKRFDPTDPKLETVRELVREGFELLGAFNWSDYLPWLSGFYDPGRIRHRCAQLVPKVNEFVRGVIDEHRRGVAPSDDSDFVDVLLSLDGDEKLNEDDMVAVLWEMIFRGTDTTALLTEWVVAELILHPEIQGEVAREIATAVDGSSLSDADVANLPYLQAVVKETLRLHPPGPLLSWARLSSSDVHLSNGMLIPENTTAMVNMWAITHDPHVWEDPHVFKPGRFVGADVDIRGCDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWGPDPCAPVDLSEVLKLSCEMKHPLSAVAVTRNGF 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 10760720 10762572 - Carg27409-RA Car20g00945 168804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car20g00945 524 Pfam Cytochrome P450 65 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car20g00945 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car18g00648 Car-Chr18:7740965 Car20g00945 Car-Chr20:10760720 3.88E-162 dispersed
Car20g00945 Car-Chr20:10760720 Car14g01047 Car-Chr14:9202212 1.85E-76 dispersed
Car20g00945 Car-Chr20:10760720 Car17g00464 Car-Chr17:3250213 6.70E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car20g00945 K20619 - csv:101214099 764.607