Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car20g00950 | ATGGGTTCCAAATCCCAACTCCTATTGAACCCACAACAAGCTTTGTTTGAAGATCAAGATCATCAAACACCACCAATTTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACCCCTTTGAGAATCCAAATTTCTCAACCTCCAACAATAATAATAATAATTCCGACACCAACCTTAATCTCTCCGAAACCCTACTTTTTTCTTCTATGAATTTGCCCCTCAAGCCCTCCCCTTTCTATGAATTTGCTCCTCCACACCTCCTTTCCTTGCAAACTTCCACTCCAAATCTATGGCCATGGGGAGAGATTGGGAAGAGAAGCAATGAAAATCAATTGGGAATTTCAACAATAAAGATGAAGAAGATCAAAGGAAGAAGAAGAGTTCGAGAGCCAAGATTTTCATTCAAAACCCTAAGCGATGTGGATGTTCTTGATGATGGTTACAAATGGCGGAAGTATGGCCAGAAAGTTGTCAAGAACACACAGCATCCTCGAAGCTATTACCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTGGAGAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCTCATGATTCTGAAGACTCTGAAGCTCAAACCCATCTCAATAATTTCTTCTGGTAA | 663 | 40.12 | MGSKSQLLLNPQQALFEDQDHQTPPISQMGFFNFPSNPFENPNFSTSNNNNNNSDTNLNLSETLLFSSMNLPLKPSPFYEFAPPHLLSLQTSTPNLWPWGEIGKRSNENQLGISTIKMKKIKGRRRVREPRFSFKTLSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 10898379 | 10900505 | - | Carg27633-RA | Car20g00950 | 168809 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car20g00950 | 220 | Pfam | WRKY DNA -binding domain | 144 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car20g00950 | 220 | ProSiteProfiles | WRKY domain profile. | 138 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car03g00946 | Car20g00950 | CCT | |
Car02g00417 | Car20g00950 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car12g00609 | Car-Chr12:4142433 | Car20g00950 | Car-Chr20:10898379 | 1.30E-47 | dispersed | |
Car20g00950 | Car-Chr20:10898379 | Car17g00350 | Car-Chr17:2214403 | 3.39E-36 | dispersed | |
Car02g00417 | Car-Chr2:3278398 | Car20g00950 | Car-Chr20:10898379 | 4.91E-51 | wgd | |
Car20g00950 | Car-Chr20:10898379 | Car03g00946 | Car-Chr3:7357790 | 3.10E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5414 | PF03106 | WRKY | 3.50E-24 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car20g00950 | - | - | cmos:111434882 | 400.593 |