Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0024 | ATGGCATCGGATCCGAACAATACGTTCCCTCTTCACCTTTTTTCAATCTTGATAAATGGCTTCGGATCCGAAGATTGCTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCCTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAATGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCCGTATAACCCAGATAAGACACCCGAGTTTGTGATTAAGATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA | 417 | 41.01 | MASDPNNTFPLHLFSILINGFGSEDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTPYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE | 138 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 143104 | 145076 | - | CcPI632755_01g000240.1 | Cco01g0024 | 168886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0024 | 138 | SMART | Cyt_b5_2 | 9 | 85 | IPR001199 | - | |
Cco01g0024 | 138 | Gene3D | - | 19 | 90 | IPR036400 | - | |
Cco01g0024 | 138 | FunFam | Cytochrome b5 type B | 19 | 89 | - | - | |
Cco01g0024 | 138 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 1 | 85 | IPR001199 | - | |
Cco01g0024 | 138 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 22 | 84 | IPR001199 | - | |
Cco01g0024 | 138 | PRINTS | Cytochrome B5 signature | 44 | 58 | IPR001199 | - | |
Cco01g0024 | 138 | PRINTS | Cytochrome B5 signature | 34 | 44 | IPR001199 | - | |
Cco01g0024 | 138 | PRINTS | Cytochrome B5 signature | 72 | 84 | IPR001199 | - | |
Cco01g0024 | 138 | PRINTS | Cytochrome B5 signature | 59 | 66 | IPR001199 | - | |
Cco01g0024 | 138 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 22 | 91 | IPR036400 | - | |
Cco01g0024 | 138 | PANTHER | CYTOCHROME B5 | 23 | 136 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Cco01g0024 | 138 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 40 | 47 | IPR018506 | GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0024 | Cco-Chr1:143104 | Cco05g0387 | Cco-Chr5:3164184 | 2.90E-47 | dispersed | |
Cco01g0024 | Cco-Chr1:143104 | Cco05g0071 | Cco-Chr5:646435 | 5.90E-32 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0024 | K23490 | - | csv:101207109 | 238.81 |