Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0126 | ATGAGCTCTCAGAATTCCGGTGAAGACTGTCTCGGTTGGGCCGCAACAGACTCCTCTGGCTTTTTATCTCCTTACAAATTCACTCGTAGGGCTCCTAGAGATGATGATGTTTCAATTACAATAACACACTGCGGAATTTGTTATGCAGATGTAATATGGACAAGAAATAAATTAGGAGATTCAAAATATCCTTTGGTGCCTGGACATGAGATTGCAGGAATTGTGAAAAATGTTGGCTCAAATGTTCAACGAATTAAAGTTGGAGATCATGTTGGGGTAGGAACTTACGTGAATTCTTGCAGACAATGCGAGTACTGTGAAGATTGTCAAGAAGTTAGTTGCACAAGTGGATGCACTCATACTTTTAATTCAATTGATTTTGACGGTACAATTACAAAGGGAGGATACTCCAACTACATAGTTGTTCATGAGAGATACTGCTACAAAATACCTGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGCATTACTGTTTATTCTCCCATGATTCTGCATAATATGAATCAACCTGGTAAATCTCTTGGTGTGATTGGGCTTGGTGGTCTCGGCCACTTAGCAGTGAAGTTTGGGAAGGCTTTTGGACTGAATGTGACAGTTTTTAGCACTAGCATTTCCAAGAAAGAAGAAGCCCTGAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGACAACGAGCAAATGAAGGCCTTGTCCAAGTCCCTCGACTTTATTATCGATGCTGCATCTGGTGATCACCCATTTGATCCATACATGTCTACATTGAAGATTGGTGGCGTTATGGTTCTGGTGGGGTTTCCTTCTCAAGTCAAGTTTAGTCCTGCTAGCCTTATTTTGGGTATGAGAACCATTTCTGGTAGCGTGACTGGTGGCACCAAAGTGACCCAAGAAATGATCGATTTCTGTGCTACTCATGGAATCTATCCAAACATAGAAGTCATTCCAATTCAGTACTCTAATGAAGCTATCGAAAGGGTAACAAAGAATGATGTCAAGTACCGATTTGTTATAGATATCGAAGGCTCCCTAAAATGA | 1068 | 41.01 | MSSQNSGEDCLGWAATDSSGFLSPYKFTRRAPRDDDVSITITHCGICYADVIWTRNKLGDSKYPLVPGHEIAGIVKNVGSNVQRIKVGDHVGVGTYVNSCRQCEYCEDCQEVSCTSGCTHTFNSIDFDGTITKGGYSNYIVVHERYCYKIPDNYPLASAAPLLCAGITVYSPMILHNMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDNEQMKALSKSLDFIIDAASGDHPFDPYMSTLKIGGVMVLVGFPSQVKFSPASLILGMRTISGSVTGGTKVTQEMIDFCATHGIYPNIEVIPIQYSNEAIERVTKNDVKYRFVIDIEGSLK | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1097201 | 1102023 | + | CcPI632755_01g001260.1 | Cco01g0126 | 168988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0126 | 355 | FunFam | Cinnamyl alcohol dehydrogenase | 165 | 320 | - | - | |
Cco01g0126 | 355 | Gene3D | - | 13 | 350 | - | - | |
Cco01g0126 | 355 | Gene3D | - | 165 | 320 | - | - | |
Cco01g0126 | 355 | SMART | PKS_ER_names_mod | 14 | 306 | IPR020843 | GO:0016491(InterPro) | |
Cco01g0126 | 355 | Pfam | Alcohol dehydrogenase GroES-like domain | 34 | 152 | IPR013154 | - | |
Cco01g0126 | 355 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Cco01g0126 | 355 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 321 | 350 | - | - | |
Cco01g0126 | 355 | ProSitePatterns | D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. | 185 | 212 | IPR029752 | - | |
Cco01g0126 | 355 | PANTHER | ALDEHYDE REDUCTASE | 8 | 351 | IPR047109 | GO:0016616(InterPro)|GO:0016616(PANTHER) | |
Cco01g0126 | 355 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 155 | 318 | IPR036291 | - | |
Cco01g0126 | 355 | CDD | CAD1 | 12 | 349 | IPR047109 | GO:0016616(InterPro) | |
Cco01g0126 | 355 | SUPERFAMILY | GroES-like | 17 | 183 | IPR011032 | - | |
Cco01g0126 | 355 | Pfam | Zinc-binding dehydrogenase | 192 | 314 | IPR013149 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0126 | Cco-Chr1:1097201 | Cco02g0077 | Cco-Chr2:828367 | 3.90E-104 | dispersed | |
Cco01g0126 | Cco-Chr1:1097201 | Cco05g1196 | Cco-Chr5:11119277 | 9.10E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0126 | K00083 | - | csv:101211438 | 676.396 |