Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0387 | ATGGAACAACCCACCTCCAATTCTCCTCTACTTCTCATAAATTCCCTCAATTCCTCAGTTGACCAATCTCCTTTCCTCTTCACCTTCTTCGCCGCTCTTCTAATTTTCCTCTATGTAAAACTCACGCGCCGGCGCGTGCCTCTTCCACCTGGTCCCTGGGGCGTTCCACTACTCGGAAACCTTCCATTCCTTGACCCCGATCTTCACACGTACTTTGCCGAATTAGGCCGAAAATATGGCCCAATAGTAAAGCTCCAACTCGGCAATAGAATTGGTATAATCGTAAATTCACCGTCCGTAGCACGTGAAGTGTTGAAAGACCACGATGTTACATTTGCGAATCGCGATGTTCCTCAAGCCGGGAGAGCCGCCTCGTACGGCGGTTCTGACATAGTTTGGACACCGTACGGACCCGAGTGGCGAATGTTGAGAAAAGTTTGTGTGTTAAAGATGCTGAGCAACGCCACTTTGGATAGCGTTTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTACCGGCGATGTGGGTCAGCAGTGAACGTGGGAGAGCAGGGGTTTTTGACGGTTTTCAACGTGGTTACAAGCATGTTGTGGGGTGGTTCAGTGGAAGGAGAGCAGAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACAATTTCGGAAATAACAGAGCTATTGGGAAAACCTAATATTTCGGACTTTTTTCCAAGCTTGGCCCGTTTTGATCTCCAAGGGATTGAGAAGAAGATGCGTGAGATTGCTCCGAGATTTGATAACATTTTCGACAAGATGATAGATGAAAGATTGAAAATTGGTGGTGGAGATGACGACGGGAGTGTCAAGAAAAATGATTTCTTGCAGTTCTTACTTGAGGTTAAAGATGAAGGAGAATCCAACACTCCTCTCACCATGACCCACCTTAAAGCCTTGCTCATGGATATGGTGGTCGGAGGGACAGACACATCGTCAAATACCATAGAATTTGCGTTGGCAGAAATGATAAAGAACCCAAAAACTCTAAAGAAAGCACAAGAAGAACTCACCGCCGTGGTCGGAGAAGACAACATCGTCGAAGAGTCCCACATTCACAGTTTCCCATATCTGAAGGCCGTAATGAAAGAAACTTTACGTTTACACCCAATTCTACCTCTGCTCGTGCCGCACTGTCCAAGCGAGACCACCATCGTCTCCAATTACGCAATTCCAAAGGGCTCTCGAGTGTTCATCAATGCTTGGGCCATTCAGCGAGACCCCAATCATTGGGAAAATCCATTGGTGTTTGATCCAGAGAGGTTTCTCAAGACCGAGAAGTGGGATTTTGGTGGGAGTGATTTTCGTTACTTCCCATTCGGGTCCGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTACTTGCTACGCTTTTGCATTCTTTTGACTGGAAATTGGAAGATGGTAAGAAGATGGAAGTTGAGGAGAAATTTGGGATTGTTTTGAAGATGAAGTCGCCTCTTGTTCTCATTCCAACGCCAAGGCTATCTAATCCAACTTTGTATCAATAA | 1569 | 46.59 | MEQPTSNSPLLLINSLNSSVDQSPFLFTFFAALLIFLYVKLTRRRVPLPPGPWGVPLLGNLPFLDPDLHTYFAELGRKYGPIVKLQLGNRIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYRRCGSAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETISEITELLGKPNISDFFPSLARFDLQGIEKKMREIAPRFDNIFDKMIDERLKIGGGDDDGSVKKNDFLQFLLEVKDEGESNTPLTMTHLKALLMDMVVGGTDTSSNTIEFALAEMIKNPKTLKKAQEELTAVVGEDNIVEESHIHSFPYLKAVMKETLRLHPILPLLVPHCPSETTIVSNYAIPKGSRVFINAWAIQRDPNHWENPLVFDPERFLKTEKWDFGGSDFRYFPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLEDGKKMEVEEKFGIVLKMKSPLVLIPTPRLSNPTLYQ | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3823790 | 3826877 | - | CcPI632755_01g003870.1 | Cco01g0387 | 169249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0387 | 522 | PANTHER | OS08G0547900 PROTEIN | 28 | 522 | - | - | |
Cco01g0387 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cco01g0387 | 522 | FunFam | Cytochrome P450 - like protein | 38 | 508 | - | - | |
Cco01g0387 | 522 | SUPERFAMILY | Cytochrome P450 | 49 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | CDD | CYP76-like | 77 | 511 | - | - | |
Cco01g0387 | 522 | Gene3D | Cytochrome P450 | 37 | 509 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | Pfam | Cytochrome P450 | 49 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 192 | 210 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 76 | 95 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 100 | 121 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco01g0387 | 522 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0381 | Cco-Chr1:3804097 | Cco01g0387 | Cco-Chr1:3823790 | 2.30E-124 | dispersed | |
Cco01g0383 | Cco-Chr1:3817197 | Cco01g0387 | Cco-Chr1:3823790 | 7.80E-108 | dispersed | |
Cco01g0387 | Cco-Chr1:3823790 | Cco01g0389 | Cco-Chr1:3834209 | 1.70E-233 | dispersed | |
Cco01g0386 | Cco-Chr1:3821735 | Cco01g0387 | Cco-Chr1:3823790 | 6.80E-51 | tandem | |
Cco01g0387 | Cco-Chr1:3823790 | Cco01g0388 | Cco-Chr1:3830046 | 2.00E-128 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0387 | - | - | - | 0.0 |