Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco01g0389 | ATGGAACCCACTTCCAATTTCCTTCACAGTCTCATTCATTCTCTCAATTTCATAGATCCCAATAACCAAACCCGCTTTCTTCTCACCCTTTTCACCGCTTTTCTACTTCTTCTTTATGTTAAATTTTGGCCACGGCGCTTCCGGCTGCCTCCGGGTCCCCCCGGCGTTCCTCTGCTCGGAAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCAAAAAATACGGCCCAATTGTCAAGCTCCAACTGGGTGGAAAAATTGGTATAATCGTCAACTCACCCTCCGTGGCACGTGAGATATTGAAGGATCACGATATCATCTTTGCCAATCGTGATGTTCCTCAGGCAGGCCGAATCGCCACGTATGGCGGTTTTGACATAAGTTGGACCCCATACGGACCTGAATGGCGGATGTTGAGAAAAATTTGTACAATCAAGATGCTTAGCAATGCAGGTTTGGATTCTGTTTATGAGCTCCGCCATAGAGAGGTTAAAAATACCGTGGCTCACTTGTACCGGCGAGCTGGGTCGGCGGTGAACGTGGGAGAGCAGGTGTTTTTGACAGTTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGGTCAGTGGATGGGGACAAAATTAGGGATGGCCTTGCGGCTGAGTTTAGACAAACGATTTCGGACATAACAGGGCTTTTGGGTAAGCCTAATGTTTCGGACTTTTTTCCGATCTTGGCCCGTTTCGATTTCCAAGGAATTGAGAAACAAATGCTTAAGCTTGTTCTGAAATTGGACACCATTTTTGAAAAGATGATTGATGAACGATTGAAAATGACCGACGTTGATGAGGGTGCGAAGAAAAATGATTTCTTACAGTTCTTACTTAAAGTCAAAGATGAAGGCGATTCCAAAACTCCACTTACCATGGTTCAACTTAAAGGCTTGCTCATGGATATGGTGATTGGTGGAACAGACACATCCTCGAACACCATTGAATTCGCAATGGCAGAGATGATGAAGAACCCAAAAGTTCTAGAGAAAGCCAAGGAAGAACTAGCGATCGTGGTTGGGGAACAGAACATCGTAGAAGAGTCCGACATACAGAGTTTGCCATATCTGAAAGCGATAATGAAAGAAACCTTGCGTCTGCATCCAATTTTGCCGCTGCTAGTGCCGCACTCCCCTAGCCAGACCACCGTCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTTTTCTTCAACGTCTGGGCCATTCACCGGGACCCCAATAATTGGGAGAATCCATTGGAGTTCGTCCCAGAGAGGTTTTTCAATGATAAATTCGATTTCAGCGGGAGTGATTTTCGTTACCTTCCATTTGGGTCTGGCAGAAGAAATTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCCTTCGATTGGAAATTGAACGAAGTTGAGAAGATTGAAATCGAGGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTGTTCTCATTCCAAGGCCTAGACTATCAGACCCCACTCTGTATCAGTAA | 1566 | 45.34 | MEPTSNFLHSLIHSLNFIDPNNQTRFLLTLFTAFLLLLYVKFWPRRFRLPPGPPGVPLLGNLPFLDPELHTYFTELGKKYGPIVKLQLGGKIGIIVNSPSVAREILKDHDIIFANRDVPQAGRIATYGGFDISWTPYGPEWRMLRKICTIKMLSNAGLDSVYELRHREVKNTVAHLYRRAGSAVNVGEQVFLTVFNVVTSMLWGGSVDGDKIRDGLAAEFRQTISDITGLLGKPNVSDFFPILARFDFQGIEKQMLKLVLKLDTIFEKMIDERLKMTDVDEGAKKNDFLQFLLKVKDEGDSKTPLTMVQLKGLLMDMVIGGTDTSSNTIEFAMAEMMKNPKVLEKAKEELAIVVGEQNIVEESDIQSLPYLKAIMKETLRLHPILPLLVPHSPSQTTVISKYTIPKGSRVFFNVWAIHRDPNNWENPLEFVPERFFNDKFDFSGSDFRYLPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLNEVEKIEIEEKFGIVLKMKKPLVLIPRPRLSDPTLYQ | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 3834209 | 3835935 | - | CcPI632755_01g003890.1 | Cco01g0389 | 169251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco01g0389 | 521 | Gene3D | Cytochrome P450 | 41 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco01g0389 | 521 | SUPERFAMILY | Cytochrome P450 | 50 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0389 | 521 | PANTHER | OS08G0547900 PROTEIN | 26 | 521 | - | - | |
| Cco01g0389 | 521 | CDD | CYP76-like | 78 | 510 | - | - | |
| Cco01g0389 | 521 | FunFam | Predicted protein | 318 | 508 | - | - | |
| Cco01g0389 | 521 | Pfam | Cytochrome P450 | 50 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco01g0386 | Cco-Chr1:3821735 | Cco01g0389 | Cco-Chr1:3834209 | 9.30E-32 | dispersed | |
| Cco01g0387 | Cco-Chr1:3823790 | Cco01g0389 | Cco-Chr1:3834209 | 1.70E-233 | dispersed | |
| Cco01g0389 | Cco-Chr1:3834209 | Cco07g0147 | Cco-Chr7:1507049 | 2.40E-94 | dispersed | |
| Cco07g1274 | Cco-Chr7:26758986 | Cco01g0389 | Cco-Chr1:3834209 | 4.10E-19 | dispersed | |
| Cco01g0388 | Cco-Chr1:3830046 | Cco01g0389 | Cco-Chr1:3834209 | 8.10E-133 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco01g0389 | - | - | - | 0.0 |