Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0432 ATGATCACGGGAGGAATGGAAGATGCGGTGGTGATCGGAGGATTGATGGCGGTGCAGTTCATTTACGCCGGAAATTCGGTGTTGTTGAGTTATTTGATGTCGTTAGGGCTTAATCCGCTCACCATCGTCGTTTGTTTTGCCTCTACAACTTCTCTGTTTCTCTCTCCTCTCGCTGTTTATTTTGAAAGGAGCAAATGGCCCAAGAAATTGAGTTTTAAGTTGACGCTTCAACTTGTGCTCATCTCTTTTGGCGGAGTAACGTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGTTGACCTCCCCAGCCATGGCTACTGCCATGCCAAACCTGGCTCCTGGTCTCATCTTTATCATCGCTTCGTGTTGTAGATTAGAGAGAGTGAAACTTAGTTGTGTGTACAGCAAAGTAAAGATTTTGGGGACATTGCTTTGTGTAGTAGGTGCTCTAACAATGAGCATAATGCAAAGCACTATTACAATACTAGCAAAAGATCAACTAATAACAACATCTCAACCTACCATTGTACTCTTCAATAAGGAAAAGATTGTTGGTTGTTTGTACTCAATGCTGGCTGTCTTCATACTATCAAGCAATGTTGTTTTGCAGGCAAATGCCCTTGGTGAATTACCAGCTCCAATGTCATTGAGTGCTGTAACATCCTTCATTGGAGTGTTCACCACTGCAGCTGTAATGCTACTCCAAAATCACAACTTACAAACAGATTGGTCAATTCTCAACATCAAGGATTTACTTTCCTATTCTCTTTTTGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGCCCAGTTTTGGTCTCAATTTTCAGTCCCATTGGAACTGTTTTCTCTCTCATTCTCTCTGTCTTCACCTTAGGAGACACTGTTTCTATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTATTGTGATGGAAGTGGCTATCAAAGTGATGACTTTGATCTTGAGAAACCTTTACTCTCTTGA 1053 41.88 MITGGMEDAVVIGGLMAVQFIYAGNSVLLSYLMSLGLNPLTIVVCFASTTSLFLSPLAVYFERSKWPKKLSFKLTLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNLAPGLIFIIASCCRLERVKLSCVYSKVKILGTLLCVVGALTMSIMQSTITILAKDQLITTSQPTIVLFNKEKIVGCLYSMLAVFILSSNVVLQANALGELPAPMSLSAVTSFIGVFTTAAVMLLQNHNLQTDWSILNIKDLLSYSLFGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSLILSVFTLGDTVSIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDLEKPLLS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4311285 4318016 - CcPI632755_01g004320.1 Cco01g0432 169294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0432 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Cco01g0432 350 PANTHER WAT1-RELATED PROTEIN 16 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco01g0432 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0432 Cco-Chr1:4311285 Cco02g1601 Cco-Chr2:28650030 8.00E-33 dispersed
Cco01g0432 Cco-Chr1:4311285 Cco10g0259 Cco-Chr10:2836476 1.50E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0432 - - - 0.0