Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco01g0469 | ATGAAAAAGAAGAATGTAAATCCAACAATTCAACAATCTTCTGATCCTCAACTTACTCACAACATTCATTCCATCGTCTTTCCCTATTTCGCTCGGTGGCAAGCTACTTATGGAAAAGTATTTATATATTGGTTGGGGACAGAGCCATTCTTATACATTGGAGAGCCAGAAATTGTGAAGATATTGTCAAAAGAAGTAAAAGCAAAGTATTGGGGAAAGCCATCAGTATTCAGAAATGATAGGAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAGTGGGTTCGTCAAAGACATATCATCACTCCTGCATTTAATCCTTCCAACTTGAAGGCGATGGCAAGCTTAATGGTGGAGTCGGCCACCCAAATGGTGGAGAGATGGACCAACCTCGTCAACTCCGGCCACCCTCAAATCGAAGTTGAGCAAGAGATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTCGGAATCCACCATGAAAGCGGCCGCCAAGTCTTCAACAAACTCCGCCATCTCCAAATCACTCTCTTCAAAACCAACCGCCTGGTGGGAGTCCCCTTCGCCGGAGTTCTAAACGCGGGCAGGGCACGGCAGGCCAAACGCCTTGGGAAGGAGATCGATGCCTTATTCCTGTCGGTAATTAGAGAGAGGAGAGAGAATTCGGCGGCGGAGGAGCAGCAGAATGATCTTTTGAGTTTGCTTTTGAAAGAGAGTAGTGGGGGCGGCGGAGAAGGGAGGAGGCCGCTGAGTACGACGGAGCTGATTGATGAATGTAAAACGTTCTTCTTTGGTGGGCATGAAACGACGGCGTTGGCTCTGACGTGGACTTTGATGCTATTGGCTATTCATTCTGAGTGGCAGACAAAGTTGAGAGAGGAAATTAAGGAAGTGTTTGGTGATAATATAAAAACTCAGTTTGATTTCACCAACCTTGCTTCACTAAAAAAGATGGGATGGGTAATGAGTGAGGTTCTACGTCTATATCCATCAGCCCCAAACGTACAAAGACAAGCAAGAAAAGACATTACAATAAACGGACTCACAATTCCAAACGGCACCAACATGTGGATCGATGTTGTAGCCATGCACCACGACCAAGCCCTTTGGGGCCCCCAAGTCAATGAGTTTCACCCTGAGAGGTTCCAAAACGACGTCATTTCGGGCGGCTGCACCCACAAGATGGGCTACTTGCCCTTTGGCTTTGGAGGAAGAATGTGTGTTGGTAGGCACTTGACGTTCATGGAGTATAAGATCGTCTTGACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCGCCCGATTACCGACATTCGCCTTCCATAATGCTCTCGCTCCGACCTGCCCATGGTCTACCTCTCGTTTTTCGGCTACTCGATGATTAA | 1401 | 46.61 | MKKKNVNPTIQQSSDPQLTHNIHSIVFPYFARWQATYGKVFIYWLGTEPFLYIGEPEIVKILSKEVKAKYWGKPSVFRNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVESATQMVERWTNLVNSGHPQIEVEQEITSTAGEIIAKTSFGIHHESGRQVFNKLRHLQITLFKTNRLVGVPFAGVLNAGRARQAKRLGKEIDALFLSVIRERRENSAAEEQQNDLLSLLLKESSGGGGEGRRPLSTTELIDECKTFFFGGHETTALALTWTLMLLAIHSEWQTKLREEIKEVFGDNIKTQFDFTNLASLKKMGWVMSEVLRLYPSAPNVQRQARKDITINGLTIPNGTNMWIDVVAMHHDQALWGPQVNEFHPERFQNDVISGGCTHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSPDYRHSPSIMLSLRPAHGLPLVFRLLDD | 466 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 4582305 | 4586513 | + | CcPI632755_01g004690.1 | Cco01g0469 | 169331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco01g0469 | 466 | Pfam | Cytochrome P450 | 23 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | P450 superfamily signature | 403 | 412 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | P450 superfamily signature | 325 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | P450 superfamily signature | 270 | 287 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | P450 superfamily signature | 412 | 423 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | Gene3D | Cytochrome P450 | 13 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | E-class P450 group I signature | 279 | 305 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | E-class P450 group I signature | 259 | 276 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | E-class P450 group I signature | 412 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | E-class P450 group I signature | 34 | 53 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | PRINTS | E-class P450 group I signature | 402 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | SUPERFAMILY | Cytochrome P450 | 23 | 462 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco01g0469 | 466 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 405 | 414 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco01g0469 | 466 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 17 | 458 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco01g0469 | Cco-Chr1:4582305 | Cco11g0560 | Cco-Chr11:5979096 | 2.10E-81 | dispersed | |
| Cco01g0469 | Cco-Chr1:4582305 | Cco05g0977 | Cco-Chr5:8531224 | 3.50E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco01g0469 | - | - | - | 0.0 |