Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco01g0571 | ATGGCATCACCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAACAGTGGAATCTCCAAGGCCAACAGCAAAGCTTCAAAGCCCTCTTCTAAGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCCTTTCTCACGGATCCCTCGACCTTGAAGATGATTATGGGGCGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGTCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAAACTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAGAGCTGGAAAAGTGCAGTTGGAGTGCTTGTGGGATTCTCGAGTTTAA | 384 | 48.7 | MASPRGGLKDFYKQRKNSGISKANSKASKPSSKKTKSPANSASLGSDAVQPAALLSHGSLDLEDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLRAGKVQLECLWDSRV | 127 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 5648018 | 5649483 | - | CcPI632755_01g005710.1 | Cco01g0571 | 169433 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco01g0571 | 127 | Pfam | DNA polymerase delta, subunit 4 | 64 | 113 | IPR007218 | GO:0000731(InterPro)|GO:0006260(InterPro) | |
| Cco01g0571 | 127 | MobiDBLite | consensus disorder prediction | 17 | 46 | - | - | |
| Cco01g0571 | 127 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cco01g0571 | 127 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 4 | 1 | 126 | IPR007218 | GO:0000731(InterPro)|GO:0000731(PANTHER)|GO:0003887(PANTHER)|GO:0006260(InterPro)|GO:0006261(PANTHER)|GO:0043625(PANTHER) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco01g0571 | K03505 | - | csv:101209940 | 210.305 |