Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0708 ATGGATAGGGCAAATTTCAAGCACACTGCTTCAGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCTTGCATTCTTATGCTTGTTTGGTTGTTGCATTATCGTGGCGGCCTTGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCACCCATTCTTCATGCTCCTCGGTTTCGTGTTCATGTCGGGGGAAGCAATGATGGCCTACAAGACAGTGAGGGGAGAAAAGAAAACAAAGAAGATAGTACACATGGCTCTGCATTTGGTAGCCATTTGCATGGGAATTGTAGGGATAAACGCTGCTTTCAAGTTTCATGATCAAGTGAACTTGGAGAATATGTTTAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTACGGCTTACAGTGGCTTTTGGGACTATGTACATTCCTGTTTCCAGGAGCAGATGCAGAGACTAAAGCCAGGCTGCTGCCATGGCACATAAGTGGAGGAAGGGCTCTGTTGCTGATGATAATATGCACAGCATTGACTGGCTTGTCTGAGAAGGCTACTTCATTGAGATTGGCTGGCAACCATGAGTCCCGTTTGCTTAACTTCACTGCTTTCTTTATCCTCCTCTTTGGAATTTCCATCGACCTCTCCATCGGTTTTGCTCGGTTTATGCATGTCGATCTCGCCATTTAG 681 44.93 MDRANFKHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVFMSGEAMMAYKTVRGEKKTKKIVHMALHLVAICMGIVGINAAFKFHDQVNLENMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAETKARLLPWHISGGRALLLMIICTALTGLSEKATSLRLAGNHESRLLNFTAFFILLFGISIDLSIGFARFMHVDLAI 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 7428681 7429954 - CcPI632755_01g007080.1 Cco01g0708 169570
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0708 226 SMART 561_7 52 178 IPR006593 -
Cco01g0708 226 Pfam Eukaryotic cytochrome b561 53 183 IPR006593 -
Cco01g0708 226 FunFam Cytochrome b reductase 1 7 220 - -
Cco01g0708 226 CDD Cyt_b561_ACYB-1_like 43 185 - -
Cco01g0708 226 Gene3D - 6 216 - -
Cco01g0708 226 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Cco01g0708 226 PANTHER CYTOCHROME B561-RELATED 11 214 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Cco01g0708 226 ProSiteProfiles Cytochrome b561 domain profile. 16 215 IPR006593 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0708 Cco-Chr1:7428681 Cco09g1370 Cco-Chr9:16655596 1.30E-47 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0708 K08360 - csv:101208884 419.853