Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco01g0708 | ATGGATAGGGCAAATTTCAAGCACACTGCTTCAGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCTTGCATTCTTATGCTTGTTTGGTTGTTGCATTATCGTGGCGGCCTTGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCACCCATTCTTCATGCTCCTCGGTTTCGTGTTCATGTCGGGGGAAGCAATGATGGCCTACAAGACAGTGAGGGGAGAAAAGAAAACAAAGAAGATAGTACACATGGCTCTGCATTTGGTAGCCATTTGCATGGGAATTGTAGGGATAAACGCTGCTTTCAAGTTTCATGATCAAGTGAACTTGGAGAATATGTTTAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTACGGCTTACAGTGGCTTTTGGGACTATGTACATTCCTGTTTCCAGGAGCAGATGCAGAGACTAAAGCCAGGCTGCTGCCATGGCACATAAGTGGAGGAAGGGCTCTGTTGCTGATGATAATATGCACAGCATTGACTGGCTTGTCTGAGAAGGCTACTTCATTGAGATTGGCTGGCAACCATGAGTCCCGTTTGCTTAACTTCACTGCTTTCTTTATCCTCCTCTTTGGAATTTCCATCGACCTCTCCATCGGTTTTGCTCGGTTTATGCATGTCGATCTCGCCATTTAG | 681 | 44.93 | MDRANFKHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVFMSGEAMMAYKTVRGEKKTKKIVHMALHLVAICMGIVGINAAFKFHDQVNLENMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAETKARLLPWHISGGRALLLMIICTALTGLSEKATSLRLAGNHESRLLNFTAFFILLFGISIDLSIGFARFMHVDLAI | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 7428681 | 7429954 | - | CcPI632755_01g007080.1 | Cco01g0708 | 169570 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco01g0708 | 226 | SMART | 561_7 | 52 | 178 | IPR006593 | - | |
| Cco01g0708 | 226 | Pfam | Eukaryotic cytochrome b561 | 53 | 183 | IPR006593 | - | |
| Cco01g0708 | 226 | FunFam | Cytochrome b reductase 1 | 7 | 220 | - | - | |
| Cco01g0708 | 226 | CDD | Cyt_b561_ACYB-1_like | 43 | 185 | - | - | |
| Cco01g0708 | 226 | Gene3D | - | 6 | 216 | - | - | |
| Cco01g0708 | 226 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - | |
| Cco01g0708 | 226 | PANTHER | CYTOCHROME B561-RELATED | 11 | 214 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Cco01g0708 | 226 | ProSiteProfiles | Cytochrome b561 domain profile. | 16 | 215 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco01g0708 | Cco-Chr1:7428681 | Cco09g1370 | Cco-Chr9:16655596 | 1.30E-47 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco01g0708 | K08360 | - | csv:101208884 | 419.853 |