Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0721 ATGGCGGGAGTAGAATTGCTGGACATGTTTCCGCATCGGGACCTGGAAGAGGGAGCAACTGCCTCGCCTGATTGGAATCCAACCGATGCTGTGCTGTTTGTTGGACTGAGTTTGGTGCTTGGAATTGCTTGCAGACACCTACTGCGAGGCACAAGAGTTCCTTATACAGTTGCCTTGCTTGTTCTTGGCATAGTTCTTGGATCCATTGAATATGGCACACATCATCAATTGGGAAAGATAGGGGACGGCATACGTCTCTGGGCAAAAATTGATCCTGATCTATTACTGGCTGTTTTCCTCCCTGCTTTGCTGTTCGAAAGTTCCTTTTCAATGGAAGTGCATCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTGGCTGGTCCAGGTGTTTTAATTTCAACTCTCTTGCTAGGATCTGCTTTCAAGCTCACTTTCCCATATAATTGGAGTTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTAGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACGATAATAGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAATTGGGGAGCTATAATCAAATATCTCACACAAGTCTCGCTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTCTATGGCTCGGATTCATTTTCAACGACACAGTGATAGAGATTGCATTAACTCTAGCTGTGAGCTATATTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTGTCCGGTGTTTTGGCGGTGATGACATTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGTGACGGTCAACAAAGCTTACATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACGTTAATTTTCATATTGAGTGGAGTTGTTATCGCTGAAGGAGTTCTTGGAAGCGAAGGAATTCTTAATAATGGAGCTTCATGGGGCTTCCTCATTCTGCTTTATGTGTATGTGCAAGCTTCTCGATTTATGGTTGTTGGTGTATTGTATCCATTTCTACGATATTTTGGATATGGCTTGGATTGGAAAGAAGCTACAATACTGATATGGTCAGGTCTGCGTGGTGCTGTTGCTCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTCTTTTTTTCACGGGTGGAATTGTATTCTTGACACTTATTGTAAATGGTTCGACCACACAATTCATTTTACATTTTCTGCACATGGACAAGCTCTCCGTGGCTAAGAAACGCATATTGGATTATACAAAATACGAGATGATGAACAAAGCATTGGGCGCCTTTCGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGCCTACAGTTAAAAGACATATTACAAGTCTTAGTCACGTGGAGGGGGAACCATTGCACCCGCACAATGCATTTGAAAGCGATCAAAATGTTCACTCTATGAATTTGAGAGACACTCGTCTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCAGGTTGCAAATGAGCCCTTATGTGATTGGAAAGGTTTAAAAGCTAATGTCCATTTTCCAAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCGGAAGTTGGTTACATATTTCACTGTGGAAAGATTGGAATCTGGATGTTATATTTGTGCTGCATTTCTCCGTGCACATAGAATTGCAAGACGACAGCTTCATGAGTTTATAGGTGATAGTGATGTTGCTTGTACTGTAATTAATGAAAGTGAGGCTGAGGGTGAAGAAGCACGAAAGTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAGGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGCTGCATCTTCATGATGCTGTTCAGACTGACTTAAAAAGGCTTCTAAGAAATCCTCCTCTGTTAAAGGTTCCGAAAATGCGGAACTTAATCACTGCCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGCGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAAGGAAGGTTCAAAGCCTAGTGGTGTTTGGCTTATATCCAATGGAGTGGTAAAGTGGGTAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGTACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGACATGATTACAGATTCCGTTGTTCTCTCTTTTTTTATTGAACATGATAAGTTTCTGTCAGTACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTCTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATTTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACCACGCATATAACAGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCCTTTTGTTAGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTAATAGCCTCACCTGCTGTATTGTTCTCCTCGCATGGGAATCCAAGCTTCCATAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCAAGGCTCCTATTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCCCTTCGATCAGATGACAATCTAAATCGGTCATCATCTTTTATACATTCTGTTGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGGTCTTATGAGTTGGCCTGAACTGCTTTCCAAGCCTAGACCACCACAGAAGCAGAAATCTGAAAGAACTGAGCGTCCAGCTGATAGCTTGTCTGAAAAGGCCATGCAACTAAGCATATACGGTAGCATGGTTGATATTCGTCAGCGGACTAAGAGTTTTCCAGGCAACACTGCTGAACCATCTCATAGCCGGTCAAATCCTGCAATTGGTTCATATAAAGGTATTCCCCTTCCATATGTGAAATCAGAAGGAGCTGCTACATTGAAGAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCACTGTTCGGCCCGCACAAGAAAAACCAGCTCCTAATGAGAGAAATGCAAGAGATGATTCAAGTGAGGAATCTGGTGGTGAGGATGATATCATTGTGAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGCGGCTTCAACAGCTGGAATCAACATTGTATATTGTGTGGTGCGATGTAGAAATATCATTCGTTACTGAGCCATCTTCTCAAGAATTTTCAAACTGGAGTTCTTAA 3531 41.63 MAGVELLDMFPHRDLEEGATASPDWNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHQLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTLLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSEGILNNGASWGFLILLYVYVQASRFMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFLFFTGGIVFLTLIVNGSTTQFILHFLHMDKLSVAKKRILDYTKYEMMNKALGAFRDLGDDEELGPADWPTVKRHITSLSHVEGEPLHPHNAFESDQNVHSMNLRDTRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDQVANEPLCDWKGLKANVHFPNYYKFLQTSIFPRKLVTYFTVERLESGCYICAAFLRAHRIARRQLHEFIGDSDVACTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLLKVPKMRNLITAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWVSKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICDMITDSVVLSFFIEHDKFLSVLRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHITGETIEIPRHSIGLLLEGFIKSHGIQEELIASPAVLFSSHGNPSFHNMENSGMSGSSFSHQGSYYEVETRSRVIIFDMAALRSDDNLNRSSSFIHSVDHPQRSLSRDHSGLMSWPELLSKPRPPQKQKSERTERPADSLSEKAMQLSIYGSMVDIRQRTKSFPGNTAEPSHSRSNPAIGSYKGIPLPYVKSEGAATLKKRLDARKLPISTVRPAQEKPAPNERNARDDSSEESGGEDDIIVRIDSPSVLSFHQRLQQLESTLYIVWCDVEISFVTEPSSQEFSNWSS 1176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7667656 7688369 + CcPI632755_01g007210.1 Cco01g0721 169583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0721 1176 SUPERFAMILY cAMP-binding domain-like 724 851 IPR018490 -
Cco01g0721 1176 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Cco01g0721 1176 Gene3D - 151 203 - -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1049 1071 - -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1095 1128 - -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1002 1031 - -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1049 1066 - -
Cco01g0721 1176 Pfam Sodium/hydrogen exchanger family 37 443 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cco01g0721 1176 PANTHER SODIUM/HYDROGEN EXCHANGER 23 769 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Cco01g0721 1176 Pfam Cyclic nucleotide-binding domain 760 843 IPR000595 -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1012 1027 - -
Cco01g0721 1176 FunFam Sodium/hydrogen exchanger 7 724 861 - -
Cco01g0721 1176 MobiDBLite consensus disorder prediction 1108 1128 - -
Cco01g0721 1176 CDD CAP_ED 737 846 IPR000595 -
Cco01g0721 1176 Gene3D Jelly Rolls 703 863 IPR014710 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0721 K14726 - csv:101209966 2107.41