Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0749 ATGAATGGAGATGTAGCTCCGGCCGCCACTCCGGCGGGCTCAGCCGAGCCCCAGTACGTCAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCCATCGCACAAAACATCAGTTCCGCCCTCGTTAAGATCAACTATTGCGGCCCTGTTTCCATTTCCGCTTATGGAGACACTAATCGCATTCCCAATTCTATTCAGCAAGCTCTTTCCAGTACTGGTATCGCCTTGAATCATGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAATCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTATTTGGCTTTGGATGAGTCTTGTAACTGGAGGACCCCCAATGTCCAGTGCTGAATCATCTCAACTTGTGAATGGTATCCTTACTTCTGACCCGCAAATATCACAGGGCTCTGGATTTGATCACAATCAGCAGACAGGACAAGCTATAGTATCTAAATCTGAAAATGTCTCTTTGGGAAACCAAAGATCGTATTCTACTGAGAGGATGGGCGACAACAAGCATAAAGGTAAATATATACAGAAAAGCTCCAACCAACCAGTCTTATCCAGAGCTTTAAGCTCACCTGTTTCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCAAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATAGCAATCCTATAGCCTCTTCTAGTCAGTCTATTCCAACCCCGTTTATTGAAAATTCCAGTCATGCTAGGACTGATGGCAATGTTCCAATGGGTAGTTCTTCGAGTTACCAACCTCCTCACATGGGTCTTGCTAGGACTGATGGCAATATGTCAATGGGTAGTTCTTCAAGTTACCAACCTCCCCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGACCAGATAATGTTTTTCCTCCCAACTCCCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGATCTCTCTGCACCCAATATTAGTAAACTACATATCTCTGATTATCCCAATTATGCTATAAATCCTCAAAATTTCGATCATCCAGCTGGTGAATTTAGACCACATACCAAGTCTCAAAATCCAAACTTTAATTCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCATTCATTCCATCATGATGCAATGAATAAAAGACATGCTCGTGATGTAGTAGAGTATACACCTCATTCATCTTCTACCACTGTTACCAGAAGTTTATCTTATAATGATGCCTGGGGATCTCAGGGGCAACCCCCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAACAGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCATTCGATATGGAGATTTGAGAAACAGCAATACTGATGTAAAAATGGCACTAGATAGTGCGATAGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCTAATCAATACCAAAAAGCTATATGGGATAAGATTCATAATTGTTTAGCTTCTCCAGCTGGTCGATCTGCAATAATGGCCTCTCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTACTCATCACATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGTTAACACAGATGCAAGTTCAAGAACTGAACTTGATTGA 1995 41.8 MNGDVAPAATPAGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSIWLWMSLVTGGPPMSSAESSQLVNGILTSDPQISQGSGFDHNQQTGQAIVSKSENVSLGNQRSYSTERMGDNKHKGKYIQKSSNQPVLSRALSSPVSMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPIASSSQSIPTPFIENSSHARTDGNVPMGSSSSYQPPHMGLARTDGNMSMGSSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPDLSAPNISKLHISDYPNYAINPQNFDHPAGEFRPHTKSQNPNFNSPDKGRSQHGGHSFHHDAMNKRHARDVVEYTPHSSSTTVTRSLSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKTEKIMPTEANIADCIRYGDLRNSNTDVKMALDSAIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIHNCLASPAGRSAIMASRCRYEAALILKKECLTDFALGDVLQILNMITSMKKWITHHISGWQPINIMLTEVNTDASSRTELD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7931101 7934135 + CcPI632755_01g007490.1 Cco01g0749 169611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0749 664 MobiDBLite consensus disorder prediction 404 443 - -
Cco01g0749 664 MobiDBLite consensus disorder prediction 210 247 - -
Cco01g0749 664 Pfam OST-HTH Associated domain 599 655 IPR025677 -
Cco01g0749 664 MobiDBLite consensus disorder prediction 210 226 - -
Cco01g0749 664 Pfam NYN domain 23 159 IPR021139 GO:0004540(InterPro)
Cco01g0749 664 Gene3D - 18 165 - -
Cco01g0749 664 MobiDBLite consensus disorder prediction 418 434 - -
Cco01g0749 664 CDD PIN_limkain_b1_N_like 23 147 - -
Cco01g0749 664 MobiDBLite consensus disorder prediction 306 358 - -
Cco01g0749 664 MobiDBLite consensus disorder prediction 306 327 - -
Cco01g0749 664 PANTHER LIMKAIN B LKAP 14 565 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Cco01g0749 664 MobiDBLite consensus disorder prediction 335 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0749 Cco-Chr1:7931101 Cco02g0075 Cco-Chr2:807968 3.80E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0749 - - - 0.0