Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0749 | ATGAATGGAGATGTAGCTCCGGCCGCCACTCCGGCGGGCTCAGCCGAGCCCCAGTACGTCAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCCATCGCACAAAACATCAGTTCCGCCCTCGTTAAGATCAACTATTGCGGCCCTGTTTCCATTTCCGCTTATGGAGACACTAATCGCATTCCCAATTCTATTCAGCAAGCTCTTTCCAGTACTGGTATCGCCTTGAATCATGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAATCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTATTTGGCTTTGGATGAGTCTTGTAACTGGAGGACCCCCAATGTCCAGTGCTGAATCATCTCAACTTGTGAATGGTATCCTTACTTCTGACCCGCAAATATCACAGGGCTCTGGATTTGATCACAATCAGCAGACAGGACAAGCTATAGTATCTAAATCTGAAAATGTCTCTTTGGGAAACCAAAGATCGTATTCTACTGAGAGGATGGGCGACAACAAGCATAAAGGTAAATATATACAGAAAAGCTCCAACCAACCAGTCTTATCCAGAGCTTTAAGCTCACCTGTTTCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCAAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATAGCAATCCTATAGCCTCTTCTAGTCAGTCTATTCCAACCCCGTTTATTGAAAATTCCAGTCATGCTAGGACTGATGGCAATGTTCCAATGGGTAGTTCTTCGAGTTACCAACCTCCTCACATGGGTCTTGCTAGGACTGATGGCAATATGTCAATGGGTAGTTCTTCAAGTTACCAACCTCCCCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGACCAGATAATGTTTTTCCTCCCAACTCCCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGATCTCTCTGCACCCAATATTAGTAAACTACATATCTCTGATTATCCCAATTATGCTATAAATCCTCAAAATTTCGATCATCCAGCTGGTGAATTTAGACCACATACCAAGTCTCAAAATCCAAACTTTAATTCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCATTCATTCCATCATGATGCAATGAATAAAAGACATGCTCGTGATGTAGTAGAGTATACACCTCATTCATCTTCTACCACTGTTACCAGAAGTTTATCTTATAATGATGCCTGGGGATCTCAGGGGCAACCCCCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAACAGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCATTCGATATGGAGATTTGAGAAACAGCAATACTGATGTAAAAATGGCACTAGATAGTGCGATAGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCTAATCAATACCAAAAAGCTATATGGGATAAGATTCATAATTGTTTAGCTTCTCCAGCTGGTCGATCTGCAATAATGGCCTCTCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTACTCATCACATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGTTAACACAGATGCAAGTTCAAGAACTGAACTTGATTGA | 1995 | 41.8 | MNGDVAPAATPAGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSIWLWMSLVTGGPPMSSAESSQLVNGILTSDPQISQGSGFDHNQQTGQAIVSKSENVSLGNQRSYSTERMGDNKHKGKYIQKSSNQPVLSRALSSPVSMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPIASSSQSIPTPFIENSSHARTDGNVPMGSSSSYQPPHMGLARTDGNMSMGSSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPDLSAPNISKLHISDYPNYAINPQNFDHPAGEFRPHTKSQNPNFNSPDKGRSQHGGHSFHHDAMNKRHARDVVEYTPHSSSTTVTRSLSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKTEKIMPTEANIADCIRYGDLRNSNTDVKMALDSAIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIHNCLASPAGRSAIMASRCRYEAALILKKECLTDFALGDVLQILNMITSMKKWITHHISGWQPINIMLTEVNTDASSRTELD | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7931101 | 7934135 | + | CcPI632755_01g007490.1 | Cco01g0749 | 169611 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 404 | 443 | - | - | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 210 | 247 | - | - | |
Cco01g0749 | 664 | Pfam | OST-HTH Associated domain | 599 | 655 | IPR025677 | - | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 210 | 226 | - | - | |
Cco01g0749 | 664 | Pfam | NYN domain | 23 | 159 | IPR021139 | GO:0004540(InterPro) | |
Cco01g0749 | 664 | Gene3D | - | 18 | 165 | - | - | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 418 | 434 | - | - | |
Cco01g0749 | 664 | CDD | PIN_limkain_b1_N_like | 23 | 147 | - | - | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 306 | 358 | - | - | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 306 | 327 | - | - | |
Cco01g0749 | 664 | PANTHER | LIMKAIN B LKAP | 14 | 565 | IPR024768 | GO:0005777(InterPro)|GO:0010468(InterPro) | |
Cco01g0749 | 664 | MobiDBLite | consensus disorder prediction | 335 | 353 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0749 | Cco-Chr1:7931101 | Cco02g0075 | Cco-Chr2:807968 | 3.80E-36 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0749 | - | - | - | 0.0 |