Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0810 ATGGCCCGCGACAACCCTCTTTTTCTTCTTTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTGTCAAGCTTAAGAGGCGTAAAATTGAAGGCTCCTTGGCTACAGCGAAGCATACGGCTGAATTGCTTCGTTCTGTTATTTCGCAGCAGCGAATACCCTACACGAATCAGGCAGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGGGTTTTGCACATTATCAGAGAGGAGGATCTCTCTCTCACTACAGCTTCTATTGCTGGGTTGAGCTTATCAGCAGTTAGTGATGATGAAGATGACACTGAAAAAGATGATCGCCCAGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGATTCATCAAACTTCATCATCTGGAGGCGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGAAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAACAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTCGTTACTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCGGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACGAACAATGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGCTTCAAGAAAAGGGAAAGAAAAAGAAGAGAAAAATTCAAAGTTGGCTGAACGAAGCTATAAGGCCAGAATTGTTTCTGCAGATCACTGCCAGAATCAATGAATCACAGATAAATCAAGATCTTTTTAGCTGTTTGGACAAGAAACTTTGGTCTTCTGTGATATTCTTTTTCCTTCTCTCTTTTTATCCCAAGCATTATTCCATGTTGAAAGTTCTTGTAGAAATGAGTTCTAGATAA 1512 42.59 MARDNPLFLLFILPYSLIMPDVQALVNDFVVKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDTEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVTEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNNGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLLQEKGKKKKRKIQSWLNEAIRPELFLQITARINESQINQDLFSCLDKKLWSSVIFFFLLSFYPKHYSMLKVLVEMSSR 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8512166 8518861 + CcPI632755_01g008100.1 Cco01g0810 169672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0810 503 MobiDBLite consensus disorder prediction 161 194 - -
Cco01g0810 503 MobiDBLite consensus disorder prediction 180 194 - -
Cco01g0810 503 Pfam Initiation factor 2 subunit family 183 407 IPR000649 GO:0044237(InterPro)
Cco01g0810 503 Gene3D - 212 419 IPR042529 -
Cco01g0810 503 MobiDBLite consensus disorder prediction 161 179 - -
Cco01g0810 503 FunFam translation initiation factor eIF-2B subunit beta 212 420 - -
Cco01g0810 503 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 21 425 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Cco01g0810 503 SUPERFAMILY NagB/RpiA/CoA transferase-like 22 424 IPR037171 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0810 K03754 - csv:101220366 731.865