Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0817 | ATGGCGCTCTCTGATAAACCCTCTCGCCAGTCTCTGATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACACGAACCCTCCCTCTCAAGAAGATGCTTCAATCTTCACCCACTCTCGATGGCGTTTCCTCTCCTACTAAGAGCTTTGTTATTCCCGCCCCCACCGAGCCGTCTAAGAAGATCGAGTTGTACTCGCCAGCCTTCTACGCTGCTTGTACCTTTGGTGGAATTCTCAGCTGTGGTCTTACGCATATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGATCCTGCGAAATACAAAAGTATTTCGTCTGGTTTTGGAGTTCTGCTTAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGTTGGGTGCCTACTCTCCTTGGATACAGTGCACAGGGTGCTTGCAAGTTTGGCTTTTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCTTGATCTACCTTGCGGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTATCAGATGGACTTCCCAAGTTTGTCAGATCTGAAGGAGCTCTTGGGTTGTACAAGGGTATAGTTCCACTCTGGGGACGCCAGATTCCATACACGATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATATAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTTTCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACCCGTGGGCTACCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATCTATGATGCCTTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGCCCTGCACCTGCTGCCCCTGCACCTGCTGCTGCTGAGCTCGCAAAGGCGTGA | 1107 | 48.78 | MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPTLDGVSSPTKSFVIPAPTEPSKKIELYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAAAELAKA | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8586453 | 8589561 | - | CcPI632755_01g008170.1 | Cco01g0817 | 169679 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0817 | 368 | FunFam | Phosphate carrier protein, mitochondrial | 67 | 345 | - | - | |
Cco01g0817 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 164 | 248 | IPR018108 | - | |
Cco01g0817 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 67 | 151 | IPR018108 | - | |
Cco01g0817 | 368 | Gene3D | Mitochondrial carrier domain | 69 | 345 | IPR023395 | - | |
Cco01g0817 | 368 | SUPERFAMILY | Mitochondrial carrier | 70 | 340 | IPR023395 | - | |
Cco01g0817 | 368 | Pfam | Mitochondrial carrier protein | 69 | 154 | IPR018108 | - | |
Cco01g0817 | 368 | Pfam | Mitochondrial carrier protein | 165 | 252 | IPR018108 | - | |
Cco01g0817 | 368 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 265 | 344 | IPR018108 | - | |
Cco01g0817 | 368 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 53 | 353 | IPR044677 | GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0817 | Cco-Chr1:8586453 | Cco05g1465 | Cco-Chr5:17548102 | 2.40E-165 | dispersed | |
Cco01g0817 | Cco-Chr1:8586453 | Cco10g0173 | Cco-Chr10:1669990 | 2.60E-10 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0817 | K15102 | - | csv:101221771 | 677.552 |