Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0968 ATGACATCCTTCACTAACCTCATCTCAATCTTCTTCTTTCTCATCTGTTTTCTCACAACCCAAGCCGTTTCACAATCTAATGAATGTGAAACCACACCCAATTCATGCACTAATAAAGACCAAGCTTTACGTCTTAAAATCATTGCCATCTTCTCGATCCTCATTGCGAGCGTGATCGGTGTTGGCTCACCACTCGTCACCCGATCGATCCCGATGTTGCACCCTGATAGAAACATGTTCATCATCCTCAAAGCCTTCGCAGCGGGCATCATTCTTGCCACCGGTTTCATGCATGTTTTGCCTGATTCTTTCGACATGCTTTGGTCGAATTGTCTCAAGGAAAATCCATGGCATAAGTTTCCCTTTTCAGGTTTCGTCGCCATGATGTCAGCCATAGTCACCCTTATGGTGGATTCTATGGCTACTAGTTTGTATACCAAGAAACATACCGAAGTTATGCCTGAGAATTCTTCGAGAGGAGGAGATGATCATGAGTTGCCAGTGGCCAGTGGCGGCCATTTCCATGGCCACCATCATAGAGACACCAAGGAAACTAAGGCTGGTTCTCAACTCTTGCGCTATCGTGTTGTTGCCATGGTTTTGGAATTGGGAATTGTGGTCCATTCAGTTGTGATTGGACTTTCACTAGGAGCAACAAATGACACTTGCACAATCAAAGGTTTAGTGGCTGCTCTTTGTTTTCATCAAATGTTTGAAGGGATGGGTCTTGGTGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAAGCAATAATGGTATTCTTTTTCTCAGTGACAACCCCATTTGGAATAGCCCTTGGAATAGGGTTATCAAAGACATACAAAGAAAACAGCCCTAGTGCACTCATCACTGTGGGGTTGTTGAATGCTTCTTCAGCTGGCCTTCTCATTTACATGGCTTTGGTTGATCTTCTTTCTGCTGACTTTATGGGTCCAAAGTTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTATATTGCTGTGCTCTTAGGAGCTGGTGCCATGTCTTTAATGGCTAAGTGGGCTTGA 1053 44.25 MTSFTNLISIFFFLICFLTTQAVSQSNECETTPNSCTNKDQALRLKIIAIFSILIASVIGVGSPLVTRSIPMLHPDRNMFIILKAFAAGIILATGFMHVLPDSFDMLWSNCLKENPWHKFPFSGFVAMMSAIVTLMVDSMATSLYTKKHTEVMPENSSRGGDDHELPVASGGHFHGHHHRDTKETKAGSQLLRYRVVAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMVFFFSVTTPFGIALGIGLSKTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYIAVLLGAGAMSLMAKWA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11353523 11356151 - CcPI632755_01g009680.1 Cco01g0968 169830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0968 350 PANTHER ZINC/IRON TRANSPORTER 39 349 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cco01g0968 350 NCBIfam ZIP zinc/iron transport family 34 350 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cco01g0968 350 Pfam ZIP Zinc transporter 44 347 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0968 Cco-Chr1:11353523 Cco04g2098 Cco-Chr4:34889891 4.90E-107 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0968 K14709 - csv:101221552 653.284