Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco01g0976 | ATGGCCGCAAAAGACGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGAAGACGCGGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGTGAAAACGGGACAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGGAAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAAGCGACCAGAAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACTCCTTGA | 402 | 46.02 | MAAKDAEQVLDVQSVVEAVVANEDADVPSYEVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECLHCGERNNEVQFAGEIQPRGCCYCLEVHASDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTP | 133 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11554757 | 11558698 | + | CcPI632755_01g009760.1 | Cco01g0976 | 169838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco01g0976 | 133 | SMART | zpr1 | 34 | 133 | IPR004457 | GO:0008270(InterPro) | |
Cco01g0976 | 133 | Pfam | ZPR1 zinc-finger domain | 31 | 83 | IPR004457 | GO:0008270(InterPro) | |
Cco01g0976 | 133 | Gene3D | ZPR1, A/B domain | 80 | 132 | IPR042451 | - | |
Cco01g0976 | 133 | PANTHER | ZINC FINGER PROTEIN ZPR1 | 7 | 132 | IPR040141 | GO:0005634(PANTHER)|GO:0005737(PANTHER) | |
Cco01g0976 | 133 | FunFam | Zinc finger protein ZPR1 | 24 | 79 | - | - | |
Cco01g0976 | 133 | Pfam | ZPR1 jelly-roll domain | 99 | 132 | - | - | |
Cco01g0976 | 133 | Gene3D | ZPR1, zinc finger domain | 26 | 79 | IPR042452 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0976 | Cco-Chr1:11554757 | Cco01g0978 | Cco-Chr1:11567905 | 3.60E-10 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco01g0976 | K06874 | - | csv:101208000 | 251.136 |