Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0983 ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGCAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGTTCAACTGAGAAAGAACTTGTGCCTGGAAAAGAGTACGAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTACAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATAATGATAAGTTGACCATCGAAGTCGCTGATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAGAGCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCTATAAAAGCACTCAATCAAAGTAA 573 41.36 MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKQEGFAELKQVCWLEVTGSTEKELVPGKEYEVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSYKKISLAGKPTDLTKFTIPNDNDKLTIEVADPKEPKPSENDDLELYFGLYEVWTNRWKGGLRIHHAFVEGVHSTYKSTQSK 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11685047 11687836 - CcPI632755_01g009830.1 Cco01g0983 169845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0983 190 Pfam Phloem protein 2 18 174 IPR025886 -
Cco01g0983 190 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 17 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0983 Cco-Chr1:11685047 Cco01g0992 Cco-Chr1:12188218 2.00E-46 dispersed
Cco01g0981 Cco-Chr1:11642342 Cco01g0983 Cco-Chr1:11685047 5.80E-40 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0983 - - - 0.0