Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g0991 ATGGTTGGTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCGACAGATAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGAAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAATAAGTTCAATATGCCAGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGGTGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG 552 44.38 MVGFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12153315 12154555 + CcPI632755_01g009910.1 Cco01g0991 169853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g0991 183 Pfam Phloem protein 2 26 175 IPR025886 -
Cco01g0991 183 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 24 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0991 Cco-Chr1:12153315 Cco04g2379 Cco-Chr4:37190861 4.60E-32 dispersed
Cco01g0989 Cco-Chr1:12053945 Cco01g0991 Cco-Chr1:12153315 2.30E-39 proximal
Cco01g0991 Cco-Chr1:12153315 Cco01g0992 Cco-Chr1:12188218 1.10E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g0991 - - - 0.0