Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco01g1021 ATGGCGAAATCGAGACAACGCTATTCAGTTCAGGATCCATCTCTATCACCCACCAATACTAGGACAAGGGAGGACGACCAATCGAGATGGACCGAGTATTTGGGGCCAGATATGACTTCTCCAGTTGCAGCTCGGAGCACTAGGAATACTGCCCATGATGGCCAGAATCCCATTTCAGTTGGGTCTCTTAAGGGTTTGAATGTTCAGTGGGTGTACCAGCTTATTGAAGTTGCAGATGGCCTCATGGCTAAAATATATAGGCTGAACCAAATCTTAGACTATCCGGATCCAATTGCTCATGTATTTTCTGAAGCATTTTGGAAAGCAGGAGTTTTCCCTAACCATCCACGGATTTGCATATTGCTCTCTAAAAAATTCCCTGAACATTTTAGCAAATTACAACTTGAGCGTGTTGATAAAATTGCTCTAGATGCCATCAATGATAGTGCAGAACTTTATATTCAGAGTCTGGAACCGTGGGTTCAGCTACTGCTTGATTTGATGGCATTTCGAGAGCAGGCTCTGCGACTTATACTAGACATTAGTAGTACGGTCATAACTTTATTGCCCCATCAAAATTCAGTTATCCTGCATGCTTTTATGGATCTATTTTGTTCCTTCGTCCGTGTTAACTTGTTCGCTCACAAGTTGCCAAGGAAAATGATGCTTCAGATTTATAACCTCTTGCATGCCATGACAAGAAATGACCGAGACTGTGATTTTTATCATCGGCTGGTTCAATTCATTGACTCATATGATCCACCTCTGAAAGGACTACAAGAGGATCTAAATTTTGTCAGCCCACGTATTGGCGAGGTCTTAGAGGCAGTGGGTCCTATTATTTTTCTGTCAACAGATACAAGAAAACTTAGAAATGAAGGATTTTTAAGTCCATACCACCCTCGATATCCAGACATACTCACGAACTCTGCTCATCCAATGAGAGCACAAGATCTTGCAAATGTCACCTCCTATCGGGAGTGGGTATTGTTTGGGTATCTTGTTTGCCCTGATGAGCTGCTTCGCGTAACCAGCATTGACATTGCTCTGGTCGTACTGAAGGAAAACTTAATTATTTCATTATTTCGAGATGAGTTCATACATCTACATGAGGATTATCAATTATATGTTTTACCAAGAGTATTAGAATCCAAGAAGATGGCCAAATCTGGGCGTACAAAGCAGAAAGAAGCCGATCTGGAGTATAGTGTTGCCAAACAGGTTGAAAAAATGATCAGTGAGATCCAGGAACAAGCGATAGTGTCTTGTGATGCCTTACATCATGAGAGGAGAATATTCCTCAAGCAGGAGATTGGAAGAATGGTGATATTCTTCACTGATCAACCGAGTTTATTGGCCCCTAATATTCAGATGGTGTATTCTGCATTGGCTTTAGCCCAATCTGAAGTGACCTGGTATTTTCAACATGTGGGAATTGCATCCTCAAAATCCAAAGCCTCCAAGATTATACCAGTGGACATAGATCCTAGTGATCCAACTATTGGATTCTTGATAGATGGAATGGATCGCCTTTGTTGTTTAGTGCGCAAGTACATTGCAGCAATTCGAGGTTATGCATTATCATATCTTTCTTCCTGTGCTGGTAGAATCCGGTTTTTGTTGGGCACTCCTGGGATGGTGGCTCTTGACTTAGATGCCAGTTTAAAGGGACTTTTTCAGCAAATTGTTCATCACCTTGAAAGCATACCTAAACCCCAGGGTGAAAACATATCTACACTCACATGTGATCTCTCAGATTTTCGGAAGGATTGGCTGTCAGTATTGATGATTGTCACATCCTCTCGGTCTTCTATTAACATTAGACACTTGGAGAAGGCAACTGTTTCCACTGGGAAAGAGGGCTTATTATCAGAAGGAAATGCTGCATATAATTGGTCCAGATGTGTTGACGAGTTAGAATCCCAATTATCAAAGCACGGAAGTCTTAAAAAGCTTTACTTCTACCACCAGCACCTTACAGCAGTCTTTAGAAATACAATGTTTGGACCTGAAGGGCGACCTCAACATTGCTGTGCATGGCTTGGCATTGCCAGTAGTTTTCCCGAGTGTGCTTCGCCAATTGTTCCAGAGGAGGTCACCAGAATTGGCAGAGACGCTGTACTCTATGTAGAGTCTCTCATTGAGTCTATTATGGGTGGTTTGGAGGGATTAATTAATATCCTTGACTCTGAAGGAGGATTTGGTGCCCTAGAGATTCAGCTTCTACCAGAGCAAGCAGCTTCTTTTCTAAATTATGCTTCGAGAGCTTCAATTCCTTTGAATAAATCTCCAAAAGGAGCAGCTGGTTTTCCCTTGCCTGGCTATGAAAGCTATCCTGAAAATAATGGTTCAATCAAAATGCTTGAAGCTGCAATGCAAAGGTTGACCAATCTATGCTCTGTTCTGAATGATATGGAGCCTATATGTGTTCTAAATCATGTTTTTGTTCTGAGGGAGTATATGAGAGAATGCATCCTTGGTAACTTCAGGAGGAGGTTACTTGCTGTAATTAAAACTGAGAATGACCTTCAGCGACCTTCTGTTTTAGAATCTTTGATTCGTCGGCATATCAGCATTATCTATCTTGCAGAGCAGCATATTAGCATGGACCTTACCCAGGGAATACGAGATGTTTTCCTTGCTGAAGCTTGCTCCGGTCCAGTTTCATCTATGCACTCATTTGAGAAGCCAGCAGAGCAACAAACAGGATCAGCAGCTGAAGCTGTGTGTAACTGGTACATTGAAAATATCATCAAGGATGCTTCAGGCGCTGGAATTCTATTTGCTCCAGCTCACAAATGCTTCAAGAGTACAAGGCCTGTCGGTGGATATTTTGCCGACTCTGTCACAGATGCCAGAGAATTACAAGCCTTTGTTCGGATATTTGGTGGCTACGGAGTGGATAAGTTAAAGCGTATGCTAAAAGAACATACAGCTGCACTTTTAAACTGTATCGACACATCATTGAGATCTAACCGTGAGGTGCTAGAGTCAGTCGCCAGCAGTCTGCATTCTGGTGACCGAATTGAAAGAGATGCATCAATCAAGCAAATTTTAGACATGGAGACGGTAATTGGATTCTGTATTCAAGCAGGTCTAGCTCTGGCGTTTGATCAGAACTTAGCTGAAGCAGCTGGAGTTGTTCTCGAAGATAGTGCACCCTTGATATATTCATTATTAGATGGTTTTGTTAAACATATTCCCGATGCATTACCTGAAAGAAAGGATATTAGGAGGATGAGAGAAGTGGCTAACAGTGTTGCAGTAATCTCTGATCATGATTCGCAGTGGATAAGATCTATTTTAGAAGATGTGGGGGGTGCAAATGATGGTTCGTGGGCTTTGTTACCATATTTATTTGCCTCCTTCATGACTTCTAATATTTGGAATTCAACTGCCTTCAATATTGATACGGGAGGCTTCAACAATAATATTCATTGCCTGGCAAGGTGCATCACTGCAGTGATTGCTGGAAGTGAATACGTGAGATTGGATCGTGAACACGAGCAGAGGCAGCCTTTTTCAAATGGTCATGCTGGTGGAACATTGAATTCTGAGGCCGACAGTCCTACATCAGTTGAAGCAAGCATAAAGTCTACAATGCAACTCTTTGTAAAACTTGCTGCTGGAATTATTTTAGATTCATGGAGTGACGCTAACAGATCTCATCTTGTACCACAGCTTATCTTTCTTGATCAACTATGTGAGGTCTCACCTTACCTTCCAAGAAGCTCTTTGGAGCCATATGTTCCTTATGCCATTCTACGTTCAATATATAGCCAGTACTATGCCAACTCTCCAGGGTCATTGGCACTCCTCAGTCCATCCCCGCGATATTCCCCCGTTGTGTCACTATCTCATGGATCCCCTGCGCCACGCCAGCCTCGTGGCGATGCTACTCCTCAGTATGGCAGTAATGATTTGAGTTACTTCAAGGGATCGATGATGCATAGTCAGAGTTCTGTCTATGATCATGATAGCGGAAGCTCAAGGAGCATTGAAACTAAACACCGTAATGCCCGTCGTTCGGGCCCTTTGGATTACAGTTCTAGCCGCAAGGTGAAATATGTTGAAGGTTCAACTTCAGGCAGCTCAGGTCCTAGCCCCCTCCCAAGGTTTGCTGTCTCGAGGTCTGGACCGCTGGCATACAAGTAA 4155 42.77 MAKSRQRYSVQDPSLSPTNTRTREDDQSRWTEYLGPDMTSPVAARSTRNTAHDGQNPISVGSLKGLNVQWVYQLIEVADGLMAKIYRLNQILDYPDPIAHVFSEAFWKAGVFPNHPRICILLSKKFPEHFSKLQLERVDKIALDAINDSAELYIQSLEPWVQLLLDLMAFREQALRLILDISSTVITLLPHQNSVILHAFMDLFCSFVRVNLFAHKLPRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALVVLKENLIISLFRDEFIHLHEDYQLYVLPRVLESKKMAKSGRTKQKEADLEYSVAKQVEKMISEIQEQAIVSCDALHHERRIFLKQEIGRMVIFFTDQPSLLAPNIQMVYSALALAQSEVTWYFQHVGIASSKSKASKIIPVDIDPSDPTIGFLIDGMDRLCCLVRKYIAAIRGYALSYLSSCAGRIRFLLGTPGMVALDLDASLKGLFQQIVHHLESIPKPQGENISTLTCDLSDFRKDWLSVLMIVTSSRSSINIRHLEKATVSTGKEGLLSEGNAAYNWSRCVDELESQLSKHGSLKKLYFYHQHLTAVFRNTMFGPEGRPQHCCAWLGIASSFPECASPIVPEEVTRIGRDAVLYVESLIESIMGGLEGLINILDSEGGFGALEIQLLPEQAASFLNYASRASIPLNKSPKGAAGFPLPGYESYPENNGSIKMLEAAMQRLTNLCSVLNDMEPICVLNHVFVLREYMRECILGNFRRRLLAVIKTENDLQRPSVLESLIRRHISIIYLAEQHISMDLTQGIRDVFLAEACSGPVSSMHSFEKPAEQQTGSAAEAVCNWYIENIIKDASGAGILFAPAHKCFKSTRPVGGYFADSVTDARELQAFVRIFGGYGVDKLKRMLKEHTAALLNCIDTSLRSNREVLESVASSLHSGDRIERDASIKQILDMETVIGFCIQAGLALAFDQNLAEAAGVVLEDSAPLIYSLLDGFVKHIPDALPERKDIRRMREVANSVAVISDHDSQWIRSILEDVGGANDGSWALLPYLFASFMTSNIWNSTAFNIDTGGFNNNIHCLARCITAVIAGSEYVRLDREHEQRQPFSNGHAGGTLNSEADSPTSVEASIKSTMQLFVKLAAGIILDSWSDANRSHLVPQLIFLDQLCEVSPYLPRSSLEPYVPYAILRSIYSQYYANSPGSLALLSPSPRYSPVVSLSHGSPAPRQPRGDATPQYGSNDLSYFKGSMMHSQSSVYDHDSGSSRSIETKHRNARRSGPLDYSSSRKVKYVEGSTSGSSGPSPLPRFAVSRSGPLAYK 1384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13039266 13058686 + CcPI632755_01g010210.1 Cco01g1021 169883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1 21 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1175 1191 - -
Cco01g1021 1384 PANTHER NCK-ASSOCIATED PROTEIN 1 64 1365 IPR019137 GO:0000902(PANTHER)|GO:0016477(PANTHER)|GO:0030031(PANTHER)|GO:0030866(PANTHER)|GO:0031209(PANTHER)
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1319 1384 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1282 1304 - -
Cco01g1021 1384 Coils Coil 785 805 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1 28 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1329 1343 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1354 1371 - -
Cco01g1021 1384 MobiDBLite consensus disorder prediction 1172 1191 - -
Cco01g1021 1384 Pfam Nck-associated protein 1 74 1264 IPR019137 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco01g1021 K05750 - csv:101216813 2645.54